F06121

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	cauline leaf (PO:0000013)	decreased size (PATO:0000587) (Cauline leaf::Shape::small)
	rosette leaf (PO:0000014)	desaturated green (PATO:0001272) (Rosette leaf::Color::pale) decreased size (PATO:0000587) (Rosette leaf::Shape::small)
	sporophyte vegetative stage (PO:0007134)	decreased speed (PATO:0000304) (Adult plant::Growth::slow)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin) abnormal (PATO:0000460) (Stem::Others) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F06121

Determination of introduced cDNA(s)

RAFL09-66-H13 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-66-H13 - Resource: pda08641

full reading [+] show sequence

AGACTGAAAA AAATGGCGGC ATCATCATCT CATCTCTTCG CACTCCCTTC 
GCCTGCTTCT CCGTTTCTAT CTGCACCAAA CCGGAATCGA GTTCGTGTTC 
TTGCGAAATC ATGCCCGGAG AATCAGAGCT TCGACTCCAA CGATTCGGAT 
TCTTCCTCAG AGACTACCCA CAAAGCCCAG GGAGATCAGA AATCAGTGTC 
ACGGAGACAG TGGATGACGG CATGTGTGTG CGCATCTGCA GCTTTAATTA 
GCAATTCTTA TACCTTTGTC TCTGTACAAA GCGCAGCCGC TTTAGACAAG 
AAACCAGGAG GTTCATGTCG TAACTGCCAG GGCAGTGGTG CTGTTCTTTG 
TGATATGTGT GGTGGTACAG GAAAATGGAA AGCTCTCAAC CGAAAACGTG 
CGAAAGATGT ATATGAGTTT ACGGAATGTC CAAACTGTTA CGGTCGAGGT 
AAGCTTGTTT GTCCGGTCTG TTTAGGTACA GGTTTACCAA ACAACAAAGG 
CCTTCTTAGA AGGCCTGGTG CTCGTGAGCT ACTCGAAAAG ATGTACAATG 
GTCGGCTTCT TCCTGATTCA TGAGAAGATT GTTACTGCAA ATATGATTTT 
AAGCACAGAG CCAGTAGACA TGATGATAGA AGCGGATGAA AACTTACACA 
TTGAGGATGC ATGGAAAGCT ATAGAAGAAT GTATCGAATT CAACATGTTT 
TTATAATGCT GCTAGGTTTG TGTTGTAAAT TCTATAAACA TAAAACTTTC 
CTTCTTCCCC ATACAGACTA GACGAATCAG TTTCGACTAA GATACTCACT 
CACTCACCTA TGCATTTAGG CATATAGAAT CACACACTTT GATT

Gene models with high sequence identity

AT2G34860.1 [+] show detail - DnaJ/Hsp40 cysteine-rich domain superfamily protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Heat shock protein DnaJ, cysteine-rich domain	0.0000000075
Gene3D	Heat shock protein DnaJ, cysteine-rich domain	0.00028

See the detailed result >

AT2G34860.1

Model type: Protein coding
Short Description: DnaJ/Hsp40 cysteine-rich domain superfamily protein
Computational Description: embryo sac development arrest 3 (EDA3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: megagametogenesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 773 Blast hits to 773 proteins in 260 species: Archae - 32; Bacteria - 427; Metazoa - 13; Fungi - 2; Plants - 175; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Link: InterPro Scan - TAIR