F06129

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F06129

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
    (Seed::Number::few)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F06129

Determination of introduced cDNA(s)

  • RAFL06-82-H14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-82-H14 - Resource: pda03833

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-82-H14 - full reading
    AAAAAAAAAA ATCCCCAAAT TCGTTTCTCT TCGATTCAAA ATCTCTCCGC 
    AAAAAATCCC CAAACACGAT CTCAACCTTG TGAGATTTCC AATCGAAATC
    GAGAAGCCAT GGATAACAGC AGCAGCATCA ATTCCACCGC TTCCACGGCC
    TCAAATCTGA GCACGGCTTC TCTGGAAAAG CTAGATCAAG CGGCGAGCTG
    GGTCAGCACC ACCGTTATTT CCGCCTTCTT CGCCTCCCTC GAGCGTTGCT
    CATGCGTTAA CCTATCTACC TCCGATGATG ACGATGAAGG CGAAGAATCT
    CACAACCGTC CCCTTGCTCT CTCCGCCGCT CCTCACCCAG ACGACATCGT
    TTAGATTCCC TTCGTTCGGT AAATCCTTCT TCGGTTTCGC CTTCTTTTTA
    TTTTTGGTGA TCTAGAAATT GTATCAACTT TTGATTGTAC ATGCCAGATT
    TGGTGTTTCT TCAAATGTTT ATGTGTAAAC CTGACTATTA TTACCTGCGT
    TTGATTCGAT ATGGTTTGTA AAAAAAAAAA AAAAA

    Gene models with high sequence identity

    1. AT4G10810.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G10810.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR