F06447

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F06447

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F06447

Determination of introduced cDNA(s)

  • RAFL09-43-D14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-43-D14 - Resource: pda08368

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-43-D14 - full reading
    GGAAAAAATC TCTCTTTCGA ATAAAAAAAA AAATCTCAGA ATCCAAAAAT 
    GGGTCGTGTC CGAAAATCAG ATTTCGGTTC CATTGTTCTT GTTCTGTGTT
    GTGTCCTAAA TAGCTTACTC TGTAATGGAG GCATCACCAG TAGATATGTC
    AGAAAATTAG AAGCAACCGT TGATATGCCT CTTGATAGCG ATGTTTTTCG
    TGTTCCTTGT GGCTACAATG CTCCTCAACA GGTGCATATA ACACAAGGAG
    ATGTAGAAGG AAAGGCAGTG ATAGTATCAT GGGTGACACA AGAAGCAAAA
    GGATCTAACA AAGTCATTTA CTGGAAAGAG AATAGCACCA AAAAGCACAA
    AGCTCATGGC AAAACCAATA CTTACAAGTT CTACAATTAT ACTTCTGGTT
    TTATCCATCA TTGCCCTATC AGAAACTTAG AGTATGACAC CAAGTACTAT
    TATGTGTTAG GTGTGGGACA AACGGAGCGT AAGTTTTGGT TCTTCACTCC
    TCCTGAGATC GGTCCTGATG TTCCCTACAC TTTTGGTCTC ATTGGGGATC
    TTGGGCAGAG TTATGACTCA AACATAACCT TAACACATTA TGAGAATAAC
    CCAACAAAAG GGCAAGCGGT TTTGTTCGTC GGCGATATCT CATACGCTGA
    TACTTATCCG GATCATGACA ATAGGAGATG GGACAGTTGG GGAAGATTTG
    CTGAAAGAAG CACAGCTTAT CAGCCTTGGA TTTGGACTAC CGGAAACCAT
    GAACTCGATT TTGCCCCGGA GATTGGTGAA AACAGACCGT TTAAGCCGTT
    CACGCATAGG TACCGAACTC CTTACCGATC ATCAGGCAGC ACCGAACCAT
    TCTGGTACTC GATAAAGAGA GGACCGGCTT ACATAATCGT GCTAGCTTCA
    TATTCAGCAT ATGGAAAATA CACACCACAG TACCAATGGC TCGAAGAGGA
    GTTCCCAAAG GTTAACAGAA CGGAAACTCC GTGGTTGATT GTTCTGATGC
    ATTCACCATG GTACAACAGC TATGATTACC ATTACATGGA AGGTGAAACA
    ATGAGGGTAA TGTATGAGGC TTGGTTTGTC AAGTACAAAG TAGATGTAGT
    TTTTGCAGGT CATGTCCACG CCTACGAAAG ATCGGAACGT GTATCAAACA
    TAGCTTACAA TGTTGTTAAC GGCATTTGCA CTCCAGTCAA AGATCAATCA
    GCTCCAGTCT ATATCACCAT TGGTGATGGA GGCAATATTG AGGGCTTGGC
    TACCAAAATG ACTGAGCCTC AGCCTAAGTA CTCTGCCTTT AGAGAAGCAA
    GCTTCGGGCA TGCTATATTC TCGATAAAGA ACAGGACGCA TGCTCACTAT
    GGATGGCATA GGAACCATGA TGGTTATGCT GTGGAGGGTG ACAGAATGTG
    GTTTTATAAC AGATTTTGGC ATCCTGTTGA TGATTCTCCT TCTTGTAATT
    CTTGAGAATC TATGAGGAAT AGGATTTGTT GTATCTCTAT GATTGAACAA
    CCATCCAAAT AAATGAATTG TTTGA

    Gene models with high sequence identity

    1. AT2G16430.2 [+] show detail - purple acid phosphatase 10
      E-value: 0; Score: 99.93

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Purple acid phosphatase, N-terminal 1.5e-38
    Gene3D no description 3.2e-113
    superfamily Metallo-dependent phosphatases 7.9e-99
    superfamily Purple acid phosphatase-like, N-terminal 1.6e-40
    HMMPfam Metallophosphoesterase 7e-27
    HMMPanther ACID PHOSPHATASE RELATED 4.7e-161

    See the detailed result >

    AT2G16430.2

    Model type
    Protein coding
    Short Description
    purple acid phosphatase 10
    Computational Description
    purple acid phosphatase 10 (PAP10); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1830 Blast hits to 1814 proteins in 380 species: Archae - 3; Bacteria - 548; Metazoa - 186; Fungi - 79; Plants - 763; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR