F06448

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F06448

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F06448

Determination of introduced cDNA(s)

  • RAFL06-84-F24 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-84-F24 - Resource: pda03872

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-84-F24 - full reading 
    ATTAGCAGAT TAAACAAATC TCAACATTCG AATTTTTAAA AATTCTTCAA 
    AATCTCTTCT TCAATGGCGA CGGGAAAGAG TTACTACGCT AGGCCTAGCT 
    ATCGATTTCT CGGCACCGAT CAGCCGTCTT ACTTCACCGC TTCCGATTCA 
    GGTCTCGAAT TCGACGAATC CGATCTCTTC AATCCAATCC ACTCCGATTC 
    ACCAGATTTT TGCCGTAAAA TCTCTTCATC AGTCAGATCC GGTAAAAAAT 
    CGTCGAATCG TCCCTCCGCC GCTTCCTCCG CCGCAGCAGC GTCGTCGCTT 
    CCTGTTAACG TGCCGGACTG GTCCAAGATT CTCCGCGGAG AATACCGCGA 
    TAACCGACGG AGAAGCATCG AGGATAACGA CGACGATGAC GATGATAACG 
    AAGACGGTGG CGATTGGTTA CCGCCGCATG AGTTTCTGGC GAAGACGAGA 
    ATGGCTTCGT TCTCGGTTCA TGAAGGAGTA GGGAGGACAT TGAAAGGAAG 
    AGATCTGAGT AGGGTTCGAA ATGCAATTTT TGAAAAATTT GGGTTCCAAG 
    ATTAAATATT TGGAAACTTT TGGAGTTTTC CTTTAATTTT TGGCTTACTT 
    CAATCATTTT CTCAAGTAAC TGTCAGAGAA GAGAGAGAGC ATGTAATATT 
    TCTAGAAATG CCCTCCATTT ATCGTTATAT TCCGAAAATC TTACCCAAAA 
    AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT5G60680.1 [+] show detail - Protein of unknown function, DUF584
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G60680.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function, DUF584
    Computational Description
    Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR