F06610

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F06610

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Seed::deep brown
Seed::light green

Original: F06610

Determination of introduced cDNA(s)

RAFL06-70-B02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-70-B02 - Resource: pda03335

full reading [+] show sequence

AAGCACATTC CAAATCATTT TCTTACCACT CAAAGAGTGC GCACTCATTA 
TCATCGTTTG AAACTAAACA TGGCGACGGA GAAAAGCAAG ATTCTGGTGA 
TCGGAGGAAC TGGTTACATC GGGAAATTCC TAGTAGAAGC GAGCGCCAAA 
GCTGGCCACT CCACATTCGC TCTCGTTAGA GAAGCAACTC TATCCGATCC 
TGTCAAGGGC AAAACCGTCC AGAGTTTCAA AGATCTCGGC GTCACAATAC 
TACACGGAGA TTTGAATGAT CACGAGAGCT TAGTGAAGGC TATTAAACAG 
GTTGATGTGG TGATATCTAC CGTTGGGAGC ATGCAAATCT TGGATCAAAC 
CAAGATCATT TCCGCCATCA AAGAAGCCGG TAATGTCAAG AGATTCTTGC 
CGTCTGAGTT TGGGGTGGAT GTGGATAGGA CGAGTGCGGT TGAGCCAGCT 
AAATCGGCTT TTGCAGGGAA GATACAGATC AGGAGAACCA TCGAAGCGGA 
AGGAATACCA TACACTTACG CTGTTACCGG TTGCTTTGGT GGTTACTACT 
TGCCAACATT GGTTCAGTTC GAGCCTGGTC TCACTTCTCC TCCTAGAGAC 
AAAGTCACCA TTCTTGGCGA TGGAAATGCC AAAGCTGTGA TCAACAAAGA 
GGAAGATATT GCTGCTTACA CGATCAAGGC GGTGGATGAT CCTAGGACTC 
TGAACAAAAT CCTATACATT AAGCCTTCTA ACAACACTTT ATCGATGAAC 
GAAATAGTCA CCTTGTGGGA GAAAAAGATT GGCAAGTCTC TTGAGAAGAC 
TCACCTCCCA GAGGAACAAC TACTTAAAAG CATCCAAGAG TCTCCGATTC 
CCATCAATGT TGTTCTGTCG ATAAACCACG CGGTGTTTGT GAATGGAGAT 
ACCAATATCA GTATAGAGCC TTCCTTTGGT GTGGAAGCCT CTGAGCTTTA 
CCCTGATGTC AAGTACACAA GTGTTGACGA GTATCTCAGT TATTTCGCTT 
GATGAACTTC ATTATAAACG TAATTTACCA CCATGACGCG CTAGTTTCAT 
GTTCTGTATC AATAAAAGAA TGGTTCTTGT AATGGTGAAT GTGTGTGTGT 
ATGTGTGACT AATCAGTAAT CACAGTGCTT TACCTCTGTT TCCGAGCTTC 
CCAAGAAATA TGAATTAGTA ATATATAACT AAAAAAAAAA AAAAAA

Gene models with high sequence identity

AT1G75280.1 [+] show detail - NmrA-like negative transcriptional regulator family protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	NAD(P)-binding domain	7.2e-20
superfamily	NAD(P)-binding domain	3.1e-64
HMMPanther	NAD DEPENDENT EPIMERASE/DEHYDRATASE	9.3e-13
HMMPfam	NmrA	3.1e-91

See the detailed result >

AT1G75280.1

Model type: Protein coding
Short Description: NmrA-like negative transcriptional regulator family protein
Curator Summary: isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.
Computational Description: NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink).
Link: InterPro Scan - TAIR