F06807

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F06807

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F06807

Determination of introduced cDNA(s)

  • RAFL06-10-A06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-10-A06 - Resource: pda02967

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-10-A06 - full reading 
    AATTCACTTC TACAAAATAT AAAGTCTCTC CCACAGTGTA AACTCTTCCT 
    CCACAAATTT TAAAGGAAGA CAAAATGATT TGGTGGTTTA TCGTTGGTGC 
    ATCCTTTTTC TTTGCATTTA TACTCATTGC AAAGGACACG AGAACAACAA 
    AAAAGAATCT ACCTCCAGGA CCACCAAGAC TTCCTATAAT TGGAAACTTG 
    CACCAATTGG GATCAAAACC TCAGCGTTCA CTATTCAAAT TATCTGAAAA 
    GTATGGATCT CTAATGTCTC TAAAGTTTGG AAATGTGTCT GCTGTTGTGG 
    CATCAACTCC AGAGACGGTG AAGGATGTCT TAAAAACATT CGACGCAGAG 
    TGTTGTTCCC GACCTTATAT GACTTATCCC GCAAGAGTTA CATACAATTT 
    TAACGATCTC GCATTTTCGC CCTATAGCAA ATATTGGAGG GAAGTACGAA 
    AGATGACGGT CATTGAGCTA TACACCGCGA AAAGGGTCAA ATCGTTTCAA 
    AATGTAAGAC AAGAAGAAGT TGCCTCATTC GTTGATTTCA TCAAACAACA 
    TGCTTCATTG GAGAAAACAG TTAATATGAA ACAGAAGTTA GTGAAACTCT 
    CTGGGAGTGT GATTTGTAAA GTTGGATTTG GCATAAGTCT TGAATGGAGC 
    AAACTTGCGA ATACTTATGA GGAAGTCATT CAAGGAACCA TGGAGGTGGT 
    GGGGCGTTTC GCAGCAGCGG ATTACTTCCC GATTATTGGT AGAATCATCG 
    ATAGGATCAC GGGGTTACAT AGCAAATGTG AGAAGGTTTT TAAGGAAATG 
    GATTCGTTTT TTGATCAATC TATAAAGCAT CACCTAGAAG ATACTAATAT 
    CAAAGACGAT ATCATTGGTT TGCTACTAAA GATGGAAAAG GGAGAGACAG 
    GACTTGGAGA GTTTCAACTT ACACGAAACC ACACTAAAGG AATTCTTCTA 
    AACGTTCTTA TCGCTGGAGT GGACACTTCT GGCCACACTG TGACATGGGT 
    GATGACACAT TTGATTAAAA ACCCAAGAGT TATGAAGAAA GCGCAAGCCG 
    AGGTAAGAGA AGTGATCAAA AACAAAGATG ATATCACAGA AGAAGATATA 
    GAACGACTCG AATATTTGAA AATGGTGATT AAAGAAACAT TAAGGATCAA 
    CCCACTTGTG CCACTTCTGA TTCCAAGAGA GGCTTCAAAA TATATAAAGA 
    TTGGAGGTTA CGAC

    Gene models with high sequence identity

    1. AT5G25180.1 [+] show detail - cytochrome P450, family 71, subfamily B, polypeptide 14
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Cytochrome P450, E-class, group I 1e-22
    FPrintScan Cytochrome P450, E-class, group I 1e-22
    FPrintScan Cytochrome P450, E-class, group I 1e-22
    FPrintScan Cytochrome P450, E-class, group I 1e-22
    FPrintScan Cytochrome P450, E-class, group I 1e-22
    FPrintScan Cytochrome P450, E-class, group I 1e-22
    FPrintScan Cytochrome P450, C-terminal 7.4e-05
    FPrintScan Cytochrome P450, C-terminal 7.4e-05
    superfamily Cytochrome P450 1.4e-81
    HMMPfam Cytochrome P450 3.3e-66
    HMMPanther CYTOCHROME P450, SUBFAMILY 71B 1.2e-203
    HMMPanther Cytochrome P450 1.2e-203
    Coil coiled-coil 0
    Gene3D Cytochrome P450 4.7e-78

    See the detailed result >

    AT5G25180.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 71, subfamily B, polypeptide 14
    Curator Summary
    putative cytochrome P450
    Computational Description
    "cytochrome P450, family 71, subfamily B, polypeptide 14" (CYP71B14); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: ytochrome p450, family 71, subfamily B, polypeptide 11 (TAIR:AT5G25120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR