F07225

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F07225

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F07225

Determination of introduced cDNA(s)

  • RAFL06-11-C05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-11-C05 - Resource: pda03064

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-11-C05 - full reading 
    ATCGTCAGCC ATGGATACTC TCTCAGCATC CGTTTCATCC TTGAACCTCC 
    CTTCTCTTCC TCCACCACCG CAGCCACCGT TGAGATCCAT CTCCAGCCGC 
    TTTAAATCCA CCGTAAACGC CACCACTTCT GCTTCATCTA CCAATCTTTC 
    AAAACCAACA TCGTCTTCAC CTTCTTCAGC ATCATACTCA CAGAACAGAA 
    ACCCTAATTT CCTCAAAGCA ATCTCGTTTC ATCTTCCGCA AACGAAACCC 
    TCGAGAGTTG TTACTCCTCC TCCTCCTCCG GTGCATGATA AAGCGGCCTC 
    AGGGTTTGCT GCGGCGCTCG TTAGCGTTTG TCAATCGAAG AATTGTCTTG 
    GTCGGACTCA AGAAGATGTC AGAAGATTGA TGGAGTTTCT TGTGGGAGAA 
    GAAAAGAAGA GGAACAAGGT CTTAGTCAAT GATGTTGTTG AGAGAGGTAA 
    ATTTGGTAAA CACTTCAAGG GCTTGGTCAA GATGTTGATT GCAAGAGGTA 
    AATCTGGGAT TCTGGTGGAT GTTTTAATGG AATTTGAGAG AATCTGTAAT 
    GAATTGGTCT CAAAAAAACT TGTCTGGGTT TCTTGATGAT ACAAAAGATT 
    ATATCTAATC CAAAGTTTGC TTCTTT

    Gene models with high sequence identity

    1. AT4G00895.1 [+] show detail - ATPase, F1 complex, OSCP/delta subunit protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G00895.1

    Model type
    Protein coding
    Short Description
    ATPase, F1 complex, OSCP/delta subunit protein
    Computational Description
    ATPase, F1 complex, OSCP/delta subunit protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, catalytic core F(1), plasma membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 48 Blast hits to 48 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 26; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR