F07233

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F07233

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F07233

Determination of introduced cDNA(s)

  • RAFL09-69-J01 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-69-J01 - Resource: pda06663

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-69-J01 - full reading
    GTCTGGTTTG AAATCAGAAT TTTAAAAAAA TTGAACAAAT TAAAAAGAAA 
    AGAAAAATCT CGTTGTTGAG AAGAAGAACA TCTTCCCCAC TCTCTCCCTT
    CTTCTTCTTC TTCTTCAACT CAAAAAACTT CTCTCTCTCT CTCTCTCTCT
    CTCTGAATCA ATTAAAAAAC GGTTTTGGGT TCTTGTCCTC TGTTCTCTAG
    TGGCTTCTAT TATTCTCATT GGTGGCTGTT CCAGCTCTCT TAAGGTCTCC
    TTAGTGTGAT CTCAGATCTG ATTGGTCCGA TTCTATTTTT CTTTTTATTT
    TGGAGATAAT TTGTTGTTGT GCAAGTTCAG ACACGAGACC CAGAAAATTT
    CAATCTCAGC TTTCGTCAAT GTTGACCCAC GACAGAGATG AAGAACTCTC
    TCTGTTCCTT GAGATGCGTC GTCGCGAGAA AGAACATAGA GCAGATTCTC
    TTTTAACAGG ATCTGATAAT GTTAGTATCA ACGCAACGTT GACGGCTGCG
    GCGGCGGCTG CTCTCTCTGG TGTCTCCGAA ACGGCGTCGT CTCAACGTTA
    TCCTCTCAGG AGAACCGCTG CTGAGAACTT TCTATATTCG GAGAATGAGA
    AGTCTGATTA CGATTGGCTG CTAACACCTC CAGGCACGCC ACAGTTCGAG
    AAAGAGTCAC ATAGAAGTGT AATGAATCAG CACGATGCTC CCAATTCCCG
    ACCCACGGTT CTTAAATCTC GGCTAGGGAA CTGTCGTGAA GATATCGTCT
    CAGGGAACAA TAATAAGCCC CAAACAAGCT CTTCCTCTGT AGCTGGACTC
    AGAAGACCAT CTTCTTCTGG TAGCTCAAGG TCAACGAGCA GACCTGCCAC
    ACCAACCAGA AGGTCTACAA CTCCAACCAC CTCCACATCA AGGCCCGTGA
    CCACCAGAGC TTCAAATTCT AGATCCTCAA CACCCACCTC ACGTGCCACC
    TTAACTGCTG CACGTGCTAC TACATCTACA GCAGCTCCAC GAACCACTAC
    TACTTCAAGC GGTTCAGCGA GATCAGCTAC TCCAACTCGG TCTAATCCTC
    GACCGTCTTC TGCATCTTCA AAAAAGCCAG TGTCAAGGCC AGCCACACCA
    ACCCGCAGGC CTTCAACCCC GACCGGTCCA TCAATAGTTT CGAGTAAGGC
    TCCGTCGCGA GGGACTTCTC CTTCTCCTAC TGTGAATTCG TTGAGTAAGG
    CTCCGTCCCG AGGGACTTCT CCTTCTCCTA CTTTGAATTC GTCGAGGCCG
    TGGAAACCAC CAGAGATGCC TGGTTTCTCT TTAGAAGCTC CACCGAATCT
    GAGGACGACT TTAGCAGACA GACCGGTCTC AGCTTCAAGA GGCAGACCTG
    GAGTAGCCTC AGCACCAGGT TCAAGATCTG GTTCCATAGA ACGCGGAGGT
    GGCCCCACCA GCGGCGGCAG CGGAAATGCA AGAAGGCAAT CTTGTTCGCC
    GTCCAGAGGT CGGGCTCCTA TCGGGAACAC CAACGGGAGT CTCACTGGTG
    TGCGTGGGCG AGCAAAGGCA AGCAACGGCG GAAGTGGCTG TGATAACTTG
    AGCCCAGTGG CTATGGGTAA TAAAATGGTT GAGAGAGTGG TGAACATGAG
    GAAACTAGGT CCACCGCGGC TAACCGAGAA TGGTGGTCGA GGATCGGGGA
    AATCTAGCTC AGCTTTTAAC AGCCTTGGAT ATGGTAGAAA CCTCTCCAAA
    AGCTCAATCG ATATGGCCAT AAGACATATG GATATAAGAC GAGGCATGAC
    TGGAAACCTC CGGCCGCTTG TGACAAAAGT TCCGGCATCA TCAATGTACA
    GTGTGAGAAG TCGGCCGGGT AGTGTCTCAA GCTCTCCGGT GGCCACGAGC
    AGCACTGTGA GCTCATCTGA CCCGAGTGTT GACAACATCA ACATTCTGTG
    CTTAGACGGA AACGAAGCCG AAAATGATGA TCTTCTTAGT GAAAGAAGCT
    ATGCTGCTTC TCCGCGGAAC CAGTACCCCA AGTTCACATC TTGACCCATA
    TTATTATGTA ATCTGTGTTC TTGTTTTTTG TTCTCACGCT TCGAAGCAAC
    TTGTTTCTAA GTGATCAACC GTATAATCTA TAAACCTCAG GCATCAAATG
    TCTTTTTTCC TTCATG

    Gene models with high sequence identity

    1. AT3G09000.1 [+] show detail - proline-rich family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G09000.1

    Model type
    Protein coding
    Short Description
    proline-rich family protein
    Computational Description
    proline-rich family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 72642 Blast hits to 41597 proteins in 1862 species: Archae - 219; Bacteria - 10073; Metazoa - 26321; Fungi - 16532; Plants - 3439; Viruses - 1862; Other Eukaryotes - 14196 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR