F07601

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	fruit (PO:0009001)	decreased length (PATO:0000574) (Silique::Shape::short)
	stem (PO:0009047)	increased thickness (PATO:0000591) (Stem::Shape::thick) decreased thickness (PATO:0000592) (Stem::Shape::thin) present in greater numbers in organism (PATO:0000470) (Stem::Number::many)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F07601

Determination of introduced cDNA(s)

RAFL05-18-O17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-18-O17 - Resource: pda07420

full reading [+] show sequence

ATAGTGTAAA GAAAACAAAA CCACTTTCTA GTTCTTAAAG AAACTAGAAA 
TCCATGGACC CGTCTCGTCA TACTCATGTG ATGCTCGTAT CTTTCCCCGG 
CCAAGGTCAC GTAAACCCTC TACTTCGTCT CGGAAAGCTC ATAGCCTCTA 
AAGGCTTACT CGTCACCTTT GTCACCACAG AGAAGCCATG GGGCAAGAAG 
ATGCGTCAAG CCAACAAGAT TCAAGACGGT GTGCTCAAAC CGGTCGGTCT 
AGGTTTCATC CGGTTTGAGT TCTTCTCTGA CGGCTTCGCC GACGACGATG 
AAAAAAGATT CGACTTCGAT GCCTTCCGAC CACACCTTGA AGCTGTCGGA 
AAACAAGAGA TCAAGAATCT CGTTAAGAGA TATAACAAGG AGCCGGTGAC 
GTGTCTCATA AACAACGCTT TTGTCCCATG GGTATGTGAT GTCGCCGAGG 
AGCTTCACAT CCCTTCGGCT GTTCTATGGG TCCAGTCTTG TGCTTGTCTC 
ACGGCTTATT ACTATTACCA CCACCGGTTA GTTAAGTTCC CGACCAAAAC 
CGAGCCGGAC ATCAGCGTTG AAATCCCTTG CTTGCCATTG TTAAAGCATG 
ACGAGATCCC AAGCTTTCTT CACCCTTCGT CTCCGTATAC AGCTTTTGGA 
GATATCATTT TAGACCAGTT AAAGAGATTC GAAAACCACA AGTCTTTCTA 
TCTTTTCATC GACACTTTTC GCGAACTAGA AAAAGACATC ATGGACCACA 
TGTCACAACT TTGTCCTCAA GCCATCATCA GTCCTGTCGG TCCGCTCTTC 
AAGATGGCTC AAACCTTGAG TTCTGACGTT AAGGGAGATA TATCCGAGCC 
AGCGAGTGAC TGCATGGAAT GGCTTGACTC AAGAGAACCA TCCTCAGTCG 
TTTACATCTC CTTTGGGACT ATAGCCAACT TGAAGCAAGA GCAGATGGAG 
GAGATCGCTC ATGGCGTTTT GAGCTCTGGC TTGTCGGTCT TATGGGTGGT 
TCGGCCTCCC ATGGAAGGGA CATTTGTAGA ACCACATGTT TTGCCTCGAG 
AGCTCGAAGA AAAGGGTAAA ATCGTGGAAT GGTGTCCCCA AGAGAGAGTC 
TTGGCTCATC CTGCGATTGC TTGTTTCTTA AGTCACTGCG GATGGAACTC 
GACAATGGAG GCTTTAACTG CCGGAGTCCC CGTTGTTTGT TTTCCGCAAT 
GGGGAGATCA AGTGACTGAT GCGGTGTACT TGGCTGATGT TTTCAAGACA 
GGAGTGAGAC TAGGCCGCGG AGCCGCTGAG GAGATGATTG TTTCGAGGGA 
GGTTGTAGCA GAGAAGCTGC TTGAGGCCAC AGTTGGGGAA AAGGCGGTGG 
AGCTGAGAGA AAACGCTCGG AGGTGGAAGG CGGAGGCCGA GGCCGCCGTG 
GCGGACGGTG GATCATCTGA TATGAACTTT AAAGAGTTTG TGGACAAGTT 
GGTTACGAAA CATGTGACGA GAGAAGACAA CGGAGAACAC TAGTGATAAT 
GATGTCTCGA AAATATCCGA CTATTTGTTG TACCGCAAAA ACCTTAACCA 
CTACAACCTT TTCTTTTTTC TTGTCAATAA ATCGTATCAA TCTCATTCCA 
AAAAAAAAAA AAAAA

Gene models with high sequence identity

AT4G15490.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	UDP-glucuronosyl/UDP-glucosyltransferase	6.3e-25
HMMPanther	UDP-GLUCOSYLTRANSFERASE	2.6e-128
HMMPanther	UDP-glucuronosyl/UDP-glucosyltransferase	2.6e-128
Gene3D	no description	5.7e-20
superfamily	UDP-Glycosyltransferase/glycogen phosphorylas	2.4e-57
PatternScan	UDP-glucuronosyl/UDP-glucosyltransferase	0
Coil	coiled-coil	0

See the detailed result >

AT4G15490.1

Model type: Protein coding
Short Description: UDP-Glycosyltransferase superfamily protein
Curator Summary: Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.
Computational Description: UGT84A3; FUNCTIONS IN: UDP-glycosyltransferase activity, sinapate 1-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15500.1); Has 8054 Blast hits to 7973 proteins in 495 species: Archae - 0; Bacteria - 428; Metazoa - 2313; Fungi - 57; Plants - 5089; Viruses - 102; Other Eukaryotes - 65 (source: NCBI BLink).
Link: InterPro Scan - TAIR