F07707

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F07707

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F07707

Determination of introduced cDNA(s)

RAFL04-16-C20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-16-C20 - Resource: pda00586

full reading [+] show sequence

ATGTATTCTT CTCCTTGTCC TTCCTTACTC TCTATATTTT TCTCAATTCT 
CCGATTTGAT CCAACGATTT CACAGATCTC TGATCTAAAT GGCATCCAAC 
GGTGATAAAG GACTGATCGT TAGCTTCGGC GAGATGCTAA TCGATTTCGT 
CCCTACCGAA TCAGGCGTCT CTCTCGCCGA AGCTCCTGGA TTCCTCAAAG 
CTCCAGGCGG TGCTCCCGCT AACGTCGCAA TCGCTGTTTC TCGTCTCGGT 
GGACGATCTG CTTTCGTCGG AAAACTTGGA GACGACGAGT TCGGTCATAT 
GTTGGCTGGG ATTTTGAGGA AGAACGGTGT TGATGATCAG GGGATTAACT 
TCGATACTGG AGCTAGAACT GCTTTAGCTT TCGTTACGTT ACGTGCTGAT 
GGAGATCGTG AGTTTATGTT TTACCACAAT CCTAGCGCCG ATATGCTTCT 
TCGTCCTGAT GAACTCAATC TCGACCTCAT CAGATCCGCG AAAGTGTTTC 
ACTATGGATC AATAAGTTTG ATAGTGGAGC CGTGTAGGTC AGCTCATTTG 
AAGGCCATGG AAGTGGCGAA AGAAGCAGGA GCTCTTCTTT CCTATGACCC 
AAACCTCAGG GAGCCTCTGT GGCCATCAAA AGAAGAAGCC AAAACACAGA 
TCATGAGCAT TTGGGACAAA GCTGAGATCA TCAAGGTGAG CGATGTTGAG 
CTTGAGTTTC TAACTGGAAG CAACAAGATT GATGATGAGA CCGCGTTGAC 
CTTGTGGCAT CCCAACTTGA AGCTGTTGTT AGTCACTCTT GGTGAAAAGG 
GCTGTCGGTA TTACACCAAG ACTTTCAAAG GAGCCGTTGA CCCTTTCCAT 
GTGAACGCTG TGGACACAAC CGGAGCTGGA GATTCCTTTG TCGGTGCTCT 
TCTAAACCAG ATTGTCGATG ATCGATCCGT TCTCGAGGAC GAAGAGAGAT 
TGAGGAAAGT GCTGAGATTC GCAAATGCTT GTGGAGCAAT CACAACGACC 
AAAAAAGGAG CCATTCCAGC TCTTCCCTCA GATGCTGAAG TTCGGAGCTT 
TCTCGAAAAG AAATAGAAAC AAAACAAACT CAAGCTTCTA TTACGTAATC 
TGTTTCCGCG ATTATCTTCT CTTTTTGTAT TCTTGTTTTC GGATGGTTGA 
ATCGAGAAGA GAAACAAATT CGGCATTCCG CTCTGTTTTT GTTTCTCTTC 
TTCAAATGTA ATGATTTAGA AAAGACGTAT GTTGCAATTT AAGGCTTCAC 
TTGCTAATAA AATGATAAGG TTTTTC

Gene models with high sequence identity

AT2G31390.1 [+] show detail - pfkB-like carbohydrate kinase family protein
E-value: 0; Score: 99.84

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	9.2e-91
FPrintScan	Ribokinase	2.6e-06
FPrintScan	Ribokinase	2.6e-06
PatternScan	Carbohydrate/puine kinase, PfkB, conserved site	0
PatternScan	Carbohydrate/puine kinase, PfkB, conserved site	0
HMMPanther	FRUCTOKINASE	2.6e-145
HMMPanther	SUGAR KINASE RELATED	2.6e-145
superfamily	Ribokinase-like	5.7e-86
HMMPfam	Carbohydrate/purine kinase	2.5e-86

See the detailed result >

AT2G31390.1

Model type: Protein coding
Short Description: pfkB-like carbohydrate kinase family protein
Computational Description: pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 18509 Blast hits to 18503 proteins in 2397 species: Archae - 386; Bacteria - 14053; Metazoa - 143; Fungi - 116; Plants - 466; Viruses - 0; Other Eukaryotes - 3345 (source: NCBI BLink).
Link: InterPro Scan - TAIR