F08223

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F08223

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F08223

Determination of introduced cDNA(s)

  • RAFL06-78-L19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-78-L19 - Resource: pda03745

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-78-L19 - full reading
    AAATCTAAAA CCCTAAATTC TCAATTGCTC GTCACACTTC GTCACTCCAC 
    CAGCGACAAT CGCCGCAGAA ACCTCTACGA AACTTGCTAC AATGGAGTTT
    TCATCACAAG ACGACGATTT TGGAGGAGAC GATTCCGCTG CTAATGCCAC
    CAGGGCTTCA GGTAATAGAA GAAGCTTCGG TGATCTTGAA GACGATGAAG
    ATGATATTTT CGGATCAACA ACGGTAGCGC CTGGTGTTAG AACTGGGATG
    ATTTTGTCTC TCCGAGGAAG TCTTAAGAAT TGTAAAGATG ATCTTGCTTC
    ATGTCAAAAT GAGCTCGAGT CAGCAAAAAC AGAGATTCAG AAGTGGAAGT
    CAGCGTTTCA GAATGAGTCC TTTGTTCCCG CTGGAAAATC TCCTGAACCA
    AGATTTTTGA TTGATTATAT TCAAAACCTA AAATCTTCTG AGAAATCTTT
    GAAAGAACAG TTAGAAATCG CAAAGAGAAA AGAAGCGTCA TGCATTGTAC
    AATATGCGAA ACGGGAACAA GAAATGGCAG AATTGAAGTC AGCTGTTCGC
    GATTTGAAAT CTCAACTCAA GCCAGCGTCA ATGCAGGCGA GGAGGTTGTT
    ACTGGATCCA GCAATTCATG AAGAATTTTC ACGTCTGAAG AATCTAGTAG
    AGGAAAAAGA CAAGAAGATC AAGGAACTCC AGGACAACAT TGCAGCAGTT
    ACTTTTACTC CTCAAAGCAA GAATGGAAAG ATGCTTATGG CAAAGTGCAG
    AACCCTGCAA GAGGAAAATG AGGAGATTGG GCACCAAGCT GCCGAAGGAA
    AGATTCATGA ACTAGCAATA AAGCTTGCAA TGCAGAAGTC TCAAAACGCG
    GAACTTAGAA GTCAATTTGA AGGACTGTAC AAACACATGG AGGAATTAAC
    TAATGATGTT GAGAGATCAA ATGAAACGGT GATAATATTG CAAGAGAAAC
    TGGAAGAGAA AGAGAAGGAG ATAGAGAGAG TAAAGAAAGG ACTGGAAATT
    GTGTCTGAGC TAGTAGGTGA CAAGAAAGAT GAAGTTGATG AAATTGATGA
    AGATGCAAAA GAAGAAATTG CTGGTGGAGA ATAGGAATTT GTAGCTTTCA
    AAAAATGTTT TGTACATTTT GAAGTTCAAA ATCACATTTC TTCATTCGTT
    ATCTGTTTCA TGAAACAGAA AGTTCTAAAC AAAAAAAAAA AAAAAA

    Gene models with high sequence identity

    1. AT3G54170.1 [+] show detail - FKBP12 interacting protein 37
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT3G54170.1

    Model type
    Protein coding
    Short Description
    FKBP12 interacting protein 37
    Curator Summary
    Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.
    Computational Description
    FKBP12 interacting protein 37 (FIP37); Has 21268 Blast hits to 13212 proteins in 1142 species: Archae - 433; Bacteria - 2157; Metazoa - 10991; Fungi - 1638; Plants - 938; Viruses - 51; Other Eukaryotes - 5060 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR