F08742

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F08742

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F08742

Determination of introduced cDNA(s)

  • RAFL09-83-C03 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-83-C03 - Resource: pda17861

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-83-C03 - full reading
    CCGCGCTTCA ATTCTAAATC TCCCGGCGAA GAAAATTACC GGCAAATTTC 
    ACGGAGAAAC CTCGCCAACG AAGCGGAGTT ATGGCGGGCA TGGCTGCGGT
    GGCAGGATTA CGACCGTGGA ACGCTTTTAT TCAAGCTCTA GTTCTGATAT
    CTCTATCATT TCCCTTTCTC TCCAGCGCTT ACCGACCTGG AGATATCGTC
    CGGATGAGCA AGATGGGGCA GTATCACTCT TCGAGAACGA CTTGGCATGA
    TGTGATCGGA AAGCATTGCC CGATCTTCGC CGTCAATCGC GAGGTGTTGA
    TCCCAATAGC GAAACCAATT GGCTACACAG GAACTGATCC TTATAAGATA
    AAATTCCAAG TTGGAAGTGA GAAATTTCTG ATTCACTGGC TTTTGGTAAT
    TAATCGTAAG AGCTCAGAAG TTCCGATGAT CGATGTAAAT TTGAGATATT
    CTGGAGGAGA TCTGCTTGGA GTCACAGCTC AAGTTATCGA CATGCCTCAT
    AGCTATCTGA ATACACACCC GGAGATCCGC AAACAGTTTT GGGATCCTCA
    ACACTGGCCA AAACATGTTC TTGTTAGATA CACATGGAAG GAGCAGTCAG
    AGATTGATGT ATCCTCAGGA TTCTATGTCC TGTTTGGCTC AGCTCTCACA
    TTTTCTTTTG TACTCTCCAT TTACGTCTTA CAATCGTCAC GAGAGAAGCT
    GGCAAGGTTT GTAAGAGAGA CGGTGGTGGA GAGCAGCAGC ATGAATGTTG
    GAGAATTTGG CAAGGGGGAT TGAGTCACAT AGTCAAGTAT ATGTATGTTT
    CTACAATTTT AGATACTTGG AATATGGAAT TGGCCGTTCA ACTCTCAGAA
    AAGATTTTTC ATCAAACATG AATAGTCGAA AGCAAAAACT TTGTCCTTGT
    AACATTATGG TTTAATAGAT TTACGTTTCT TAAAAGAAAA A

    Gene models with high sequence identity

    1. AT3G51610.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative str...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G51610.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR