F08819

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F08819

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Original: F08819

Determination of introduced cDNA(s)

  • RAFL06-73-P11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-73-P11 - Resource: pda03463

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-73-P11 - full reading 
    ACACAGCATT ATCCAAAACT CAAAATTACA GCGTTGAAAC AGAAACCGAT 
    CTCGTCGCTG ATTCTCTTTT CTTCGGATCC TTCTAGATAA TGGCTCGATC 
    TTTCTCTCGT TCACTTTCTC TATCCAAAGG CCGTTTCGCC GCCGCGTCAT 
    CCTCTCTCCT CCCTTCGTCG CACCTTGTTT CATTCCGATC TCAATCTTCC 
    GATCGTCGGG GAGATCTGTA CGAGATTGAT ACCTCCGCGG CTTCTCAATC 
    GCCGTCGGAT CCTTTAATAC AGAAGCTAGA AGACGCCGTT CACCGGATTT 
    TTGTGCGCCG AGCTCAGCCT GATTGGCTCC CTTTTGTTCC TGGTGCGTCT 
    TATTGGGTCC CTCCTCCTGG ATCTGGATCT CAGTCTCATG GAATCGCTCA 
    GCTCGTTGTG AAACTCGCGA ATCCGTTAAC ACACGAAGAA TCTTTATCTA 
    CCAATTCTTC TCATGGATGG CCTTCCTCCG ATTATTTCCT TAAAGGTGTT 
    CAACCTCAAT TGATGGAGAC CAAGACCGAG ACAACTTCAA ATTCCGAGTC 
    TCACTCTGAG GACGAGGAAG TGTAAAAATG ACACTGCTTG TTTGGGCTCT 
    TCAGGATCTC TTGTCAAGAC CAAGAGCTGC CGAATTCGGA CAACCAAGAG 
    CAAGTGAAAA GACGTGAAAT AGAACGACCA TATTTCTATA CCTGATACCA 
    AAATGTGGAA TATCGAATAA GACTAGTGTT GTAGGCTTGT GTAGCATGTC 
    CCGCTGTTTC TCTTTTAAAC AGTTGTTGTA TATATATATC TCTGTTTCCT 
    TGCTC

    Gene models with high sequence identity

    1. AT1G16840.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G16840.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR