F09207

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F09207

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F09207

Determination of introduced cDNA(s)

  • RAFL05-07-L01 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-07-L01 - Resource: pda00925

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-07-L01 - full reading 
    CTGCCTTTCC TCTTTCTCTC TCTCTATCTA TCAAACACTA GACTTGAAGA 
    AATGCAGTGA AATTGAAATT GAGTAGAAGC AGAAGAGAAT ATGGTGGTAA 
    GGAAGGTGGG CAAGTATGAA TTAGGTAGAA CAATCGGCGA AGGTACTTTC 
    GCTAAAGTCA AGTTCGCTCA GAATACAGAG ACCGGTGAGA GCGTCGCCAT 
    GAAAATCGTG GATCGTAGCA CAATCATCAA GCGCAAGATG GTGGATCAGA 
    TTAAGAGAGA GATCTCGATT ATGAAGCTTG TTCGTCATCC TTGTGTTGTT 
    CGTCTTTATG AGGTTCTAGC AAGCCGTACA AAGATTATAT CATCCTGGAG 
    TACATTACTG GTGGTGAACT GTTTGATAAG ATTGTTCGTA ATGGACGACT 
    TAGTGAGTCA GAAGCTAGGA AATACTTTCA CCAGCTTATT GATGGAGTTG 
    ATTACTGTCA TAGTAAAGGT GTTTACCACA GAGATCTAAA GCCGGAAAAT 
    CTTCTGTTGG ATTCTCAAGG AAATCTCAAG ATATCTGATT TTGGCCTCAG 
    TGCATTACCT GAACAAGGAG TTACCATCCT AAAGACAACA TGTGGAACTC 
    CCAATTACGT TGCTCCTGAG GTTCTCAGTC ACAAGGGTTA CAATGGTGCC 
    GTTGCAGATA TTTGGTCCTG TGGGGTCATC CTTTATGTTC TTATGGCAGG 
    ATATCTTCCA TTTGATGAAA TGGATCTACC AACTTTATAT AGTAAGATCG 
    ACAAAGCTGA GTTCTCTTGC CCCTCATATT TTGCCCTGGG GGCAAAGTCC 
    TTGATTAATA GAATTTTGGA TCCAAATCCA GAAACTCGGA TTACAATTGC 
    AGAAATCAGG AAAGATGAGT GGTTTCTAAA GGATTACACT CCTGTACAAC 
    TTATCGATTA CGAACATGTA AACCTGGATG ATGTATATGC TGCTTTTGAT 
    GATCCGGAGG AACAAACATA TGCACAGGAT GGAACAAGAG ACACAGGTCC 
    ACTAACTCTA AATGCGTTTG ACCTAATTAT TCTATCTCAG GGCTTGAACC 
    TCGCAACTCT TTTTGACCGT GGAAAGGACT CCATGAAGCA CCAGACAAGG 
    TTCATCTCAC ACAAGCCAGC AAACGTGGTT CTCTCAAGCA TGGAAGTTGT 
    GTCACAGTCT ATGGGCTTTA AGACACACAT TCGTAATTAC AAGATGAGAG 
    TGGAAGGATT ATCTGCAAAT AAGACATCTC ATTTCTCCGT CATACTAGAA 
    GTCTTCAAAG TTGCACCATC AATTCTCATG GTAGACATTC AAAATGCAGC 
    AGGAGACGCA GAAGAATACC TTAAGTTCTA CAAGACTTTT TGTAGTAAGC 
    TTGATGACAT CATTTGGAAG CCGCCAGATG CATCTATGAG AAATCGAGTC 
    ACCAAGGCCA AGAGTAAAAG ACGTTGAATC CACGTGCGTG GTATTCAAGC 
    AGAGCTTTCA CAGAAGACAG TTAGAAACAA TATTTAACTC TCTGTGTTTC 
    TTAAGTGCTT TAGTCGAGTG AATATGTACA AGCTTGTTGA TTTGGTTTTA 
    ATTTATGAAT ACATAGAAGA TTGTACTAAA CTTATACGAT ATCAAGACTA 
    AATTGAGTGA AAATTGCTTA AAAAAAAAAA AAAAA

    Gene models with high sequence identity

    1. AT4G24400.1 [+] show detail - CBL-interacting protein kinase 8
      E-value: 0; Score: 99.88

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SERINE/THREONINE PROTEIN KINASE 2.1e-16
    HMMPanther CBL-interacting protein kinase 4.3e-164
    HMMPanther Calcium/calmodulin-dependent protein kinase-like 4.3e-164
    HMMSmart Serine/threonine-protein kinase domain 9.1e-49
    HMMSmart Tyrosine-protein kinase, catalytic domain 8.8e-06
    HMMPfam Serine/threonine-protein kinase-like domain 8.8e-14
    HMMPfam Serine/threonine-protein kinase-like domain 1e-52
    HMMPfam NAF domain 5.1e-20
    superfamily Protein kinase-like domain 4.2e-20
    superfamily Protein kinase-like domain 9.2e-64
    ProfileScan Protein kinase, catalytic domain 14.521
    ProfileScan Protein kinase, catalytic domain 39.707
    ProfileScan NAF/FISL domain 11.802
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    Gene3D no description 1.3e-19
    Gene3D no description 1.3e-62

    See the detailed result >

    AT4G24400.1

    Model type
    Protein coding
    Short Description
    CBL-interacting protein kinase 8
    Curator Summary
    Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response.
    Computational Description
    CBL-interacting protein kinase 8 (CIPK8); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to nitrate, root development, response to glucose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35410.1); Has 132292 Blast hits to 130130 proteins in 4671 species: Archae - 192; Bacteria - 15224; Metazoa - 49173; Fungi - 13311; Plants - 31935; Viruses - 538; Other Eukaryotes - 21919 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR