F09513

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F09513

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F09513

Determination of introduced cDNA(s)

RAFL06-72-L08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-72-L08 - Resource: pda03401

full reading [+] show sequence

ATCCTCCAAA TTTGATACCT CTTCCCTCAC AATCTCCAAC AATGGCTGAC 
GATAAGAAGA AGCGGAACAA GAAGAAGCGT AGTACTGGTA ACAAGAGGAA 
GATGACCACT GAGCAATCAG AAGCCTTTAA GTCAATCACC GATTGGCTCA 
TCTTAGGTTC TTCTCCATCT CTCTCCTCTT CCTCTGATGA CTTTGCCGTC 
AACATCAATT CTGGTTCTCT AAGATGTGGA GAGAAAGTTG TGTTTGAGCT 
TCATTCTCAT TCAAATCGCA GCGATGGGTT TCTATCACCT TCAAAGGTCG 
TGGAGAGGGC TTATAACAAT GGGGTGAAAG TTCTTTCTTT AACGGATCAT 
GATACTATGG CTGGTGTCCC GGAAGCAGTG GAAGCAGGAC GTAGATTCGG 
TATCAAGATC ATTCCGGGTA TTGAGATCAG CACATTATTC GGTTTAAGAG 
ACTCCGGGTC TGAGGAGCCA GTGCATATAC TTGCGTATTA TGGCACTTCC 
GGTCCAGCAT TATATGATGA GTTGGAAGAT TTCTTGGTGA AGATAAGAGA 
TGGGCGTTTC GTTCGTGGGA GAGAAATGGT ATTGAAATTG AATAAGCTAA 
AGATACCTTT AAAATGGGAG CATGTTACCA GGATTGCAGG CAAGGATGTT 
GCCCCGGGTA GGATGCATGT AGCCCGAGCG CTTCTTGAAG CAGGCTACGT 
GGAGAATTTG AGACAAGCTT TCACTAAATA TTTACATGAT GGTGGACCTG 
CTTATGCTAC AGGGACTGAG CCTATGGCCG AGGAAGCAGT AAAACTTATA 
TGCAAAACCG GTGGTGTAGC TGTGCTTGCA CATCCGTGGG CGTTGAAGAA 
TCATGTCGGT ATTATTAGGA GATTGAAGGA TGCTGGACTT CATGGGGTCG 
AGGTTTATAG GAGCGACGGC AAGTTAGAAG TGTTTAGCGA GTTGGCTGAT 
ACATACAATC TGCTAAAGCT AGGAGGATCA GATTATCATG GAAAAGGCGG 
ACGCAATGAA TCAGAATTGG GGAGTGTAAA CCTTCCCGTG ACGGCATTGC 
AGGACTTCTT GAACGTTGGA CGTCCTATAT GGTGTGAGGC CATTAAAGCA 
ACCATGAGAG CATTCCTTGA CCAACCATCA GATTCAAACC TCTCCAATAT 
CTTAAGGTTC GATAAGGCAA GGATTCTGAA AGGAAATTCA GCTTGGTCCT 
GTGGTAAGGA GTTGATGGAC CGATGTTTAG CGATTTGGTT GACCAGTGAT 
GAGAGAAACA GCAATGACTT TGAGGCTCTC AGATTGAAGC TCTCTTTTGT 
ACCAATCATG TCAAACGGAA CATGTGTCAC AGTTGGTCCT TAAATATTTA 
GTCTGGTCTC TTTTTATCT

Gene models with high sequence identity

AT2G13840.1 [+] show detail - Polymerase/histidinol phosphatase-like
E-value: 0; Score: 99.78

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	0.00013
superfamily	Polymerase/histidinol phosphatase-like	5.6e-35
HMMSmart	Polymerase/histidinol phosphatase, N-terminal	5.6e-24
HMMPfam	PHP, C-terminal	3.9e-20

See the detailed result >

AT2G13840.1

Model type: Protein coding
Short Description: Polymerase/histidinol phosphatase-like
Computational Description: Polymerase/histidinol phosphatase-like; FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), Polymerase/histidinol phosphatase, N-terminal (InterPro:IPR003141), PHP, C-terminal (InterPro:IPR004013); Has 4358 Blast hits to 4353 proteins in 1589 species: Archae - 140; Bacteria - 3576; Metazoa - 0; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink).
Link: InterPro Scan - TAIR