F09547

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F09547

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F09547

Determination of introduced cDNA(s)

RAFL06-74-I12 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-74-I12 - Resource: pda03505

full reading [+] show sequence

ATCAAAAACC CAAATCTCTC TGTTCGCAGA GAGGATCAAT TCGTGATTCA 
GAGAATCAAA CTTACTGTGA GAGAGAGATA ACGAAGATGG ACGCTATGAG 
GAAGCAACTC GATGTGCTCA TGGGAGCTAA CAGAAACGGC GATGTCACTG 
AGGTCAATCG CAAATACTAC GACCGCGATG TTTGCCGTCT TTACCTCTCT 
GGTCTCTGCC CTCACGAGCT TTTCCAATTG ACGAAAATGG ATATGGGTCC 
TTGCCCAAAG GTGCACTCTT TGCAGCTGAG GAAAGAATAT AAAGATGCAA 
AGGCAAAAGG TGTTGACAAC TATGATAGGG AATTGGAAGA TGCGATAGAT 
AGGCTTATTG TTGAGTGTGA TAGGAAGATT GGTAGGGCTC TTAATCGTCT 
TCAAGAAGAG GATGCCAAAG CTGCCATTGC AATTTCTGTC ACAGAATTTA 
CTCAGTCACC TGAAATTCTT GAATTATCGA AGCAAATCAA AGAAAAGATG 
AAGGAAGCAG ACCTGCACGA TCTTGAAGGC AAAACAGATC TGAAGATTAG 
AGCTCTTGAG TTAGTTGAAG AGATGAGGAC GAAGAGAGCT GACCTACAGG 
CTGTGCTACT GTTGGATGCC TTTAACAAAG ATAGGACATC CTTGCAACAG 
GCAGTTCCAG CTCAGCAACC AGCTGCAACT TTACCTCCGC CCGATCCTCG 
TACTCAAGAA ATGATCAATG AAAAACTAAA GAAAGCAGAA GAGCTTGGTG 
AACAAGGGAT GGTTGATGAA GCGCAGAAAG CACTAGAAGA GGCGGAAGCT 
CTTAAGAAGC TTACTGCTAG ACAAGAACCT GTAGTGGATT CAACCAAGTA 
CACTGCTGCT GACGTGCGCA TTACAGACCA GAAGCTGCGT CTATGTGACA 
TATGCGGAGC ATTTTTGAGC GTCTATGACA GTGATCGTCG GTTAGCTGAT 
CATTTTGGAG GGAAGCTTCA CTTGGGTTAC ATGCTGATCC GCGACAAATT 
GGCAGAGCTT CAGGAGGAGA AGAACAAAGT TCACAAGGAA CGGGTCGAAG 
AAAGGAGATC AAAGGAGAGG AGTAGAGAGC GAGAATCAAG TAAAGACAGA 
GACGGAGGAG ATAACCGTGA CCGAGGAAGA GATGTTGACC GCAGGAGTAG 
AGATCGTGAC AGGCACCATG ACCACCGAGA ACATGACAGA AACTATAATC 
AGTCACGTGG CTATGACTCA AGAAGCCGGC GCAGTTCACG GTCCCGGTCT 
AGGGAAAGAC CGAGGGATCA TGATCGCCGC AGACGCCATG ACCGCTACTA 
AAACCCTGCC AAAGATGGTT GCACCTGGTT TAAGAGGTTC TTACAGATGC 
GTTTAGGATC TATTTGGAGT TACAAACACT TTCTTTTTTC TTTGCTCAAG 
TGTTTTAAGG ATTTTTGAGA TTGTAACTTA CTTTAAGTTT GTAAGAGGAG 
CTTCTTCAGA TATCTTTAAT TTGTTTTTTA TGTTGTTGAC ATCAAAGACT 
TGCGAGTAGA AAGAAGATTT TGTTGATCC

Gene models with high sequence identity

AT5G17440.1 [+] show detail - LUC7 related protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	UNCHARACTERIZED	0
HMMPanther	LUC7 related	0
HMMPfam	LUC7 related	1.9e-41
HMMPfam	LUC7 related	1.8e-51
Coil	coiled-coil	0
Coil	coiled-coil	0

See the detailed result >

AT5G17440.1

Model type: Protein coding
Short Description: LUC7 related protein
Computational Description: LUC7 related protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR