F09630

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F09630

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
  • present in fewer numbers in organism (PATO:0001997)
    (Cauline leaf::Number::few)
rosette leaf (PO:0000014)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F09630

Determination of introduced cDNA(s)

  • RAFL06-84-A02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-84-A02 - Resource: pda03866

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-84-A02 - full reading 
    ATAAACAAAA AGAATTTGAA CCAACAAAGC AAAACATGAA AGGCACATTC 
    ACTAACTTGC TTGTGCTCCT TCTCATTGCA CTTGTTTGTG CCAATGTCGG 
    TGCTAGGAAA CTTATCTCCG AAGATACCCA ATTCAAGGAT GAAAAATCTT 
    TCCTCGGAGG CGGTGGCAGC GGTGATGGCT TAGGGCTTGG CCTTGGTGGA 
    GGAGCTGGTC TTGGTGGGCT TGGGATTGGG GCTGGGATCG GCGCGGGAGC 
    CGGACTAGGG TTAGGTGGAG GCGGTGGTGG ACTCGGAGGT GGTGGCGGTG 
    GACTCCTCGG TGGAGGCGGC TTTGGGGGAG GAGCCGGTGG CGGACTCGGT 
    GGCCTTCCTT GAACGTATTG ACAAGTGTGC GTGTGAGAGC TGATTCTCAG 
    CTTATTACTA ATTAATTAAG TTACTTTCAT TCTCTTAATA AAATCTAGAG 
    GATTTGAATT TCGGATTTCT TCAGCTTTAA TTTAAACTTC AATATTTGAA 
    CCAAAAAGGT CTTGCTACTA GAGGTAATGC TCGTAATCGT ATTATGTGTA 
    ACGCCGGTTC TGATATTCTT AAGTGCAAGT GTGGAACGTT TCTCTTTTAT 
    TCACTATATA GCATTACTTT CTTTTTTCTT GTTTATATAT CGCTAAACAA 
    AATGTATTTT TAATTTGTTT TGAGCAAAAA AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT1G11850.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 99.85

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan PRICHEXTENSN 2.4e-13
    FPrintScan PRICHEXTENSN 2.4e-13
    FPrintScan PRICHEXTENSN 2.4e-13

    See the detailed result >

    AT1G11850.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; Has 84259 Blast hits to 16502 proteins in 1194 species: Archae - 107; Bacteria - 41190; Metazoa - 21798; Fungi - 3523; Plants - 7569; Viruses - 886; Other Eukaryotes - 9186 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR