F09848

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F09848

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F09848

Determination of introduced cDNA(s)

  • RAFL09-64-O14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-64-O14 - Resource: pda08605

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-64-O14 - full reading 
    GTCAAATCAT TTTCGACGAC TGTTATTAAT AATTAATTCG TTAATGACGC 
    ACCGTTAGTC AACTCCGCTT CGTATTAATT ACTCCTCCGA TCTCTTTCTT 
    ATTCTTCTCC GGCGACACTT CCCTTGCTTC TCCCTCTTAG GACTCTCTCT 
    ACGAATCTGT AAGCTTCAAA TTCTTACGCC ACACTCCGAG ATTCGCTTCT 
    GATTATTGTA TGAATTTTTG AGCTCCAAGG ATCCACTGCC ATGTATTTAT 
    GCTGCTAAAG CTTGAAGGCA GTAGTGGAAT CACCATTAAG TTCTTTGCTT 
    TGTAATTTAG CTTGATTTGA GAATAAACAA ATGGGAAAAG CATCAGGCTT 
    GCTTCTGTTT CTCTTGGGTT TTGGGTTCTT TGTTGTCACA TATAATCTTC 
    TGACACTTAT AGTTCACAAT AGATCTGGTG TGAGTAATTC AGATGGAAGT 
    CCACTTCTGG ATCCTGTTGT TCAGATGCCT CTAAATATTA GGAAAGCCAA 
    GAGTTCTCCA GCACCTTTTC ATGTTGCCTT AACAGCTACA GATGCACCTT 
    ATAATAAGTG GCAGTGTCGT ATTATGTATT ATTGGTATAA GCAGAAGAAA 
    GCTCTTCCTG GTTCTGATAT GGGTGGCTTC ACCCGTATTT TGCATTCCGG 
    TAATTCTGAT AACTTGATGG ATGAAATACC CACATTTGTG GTTGATCCTC 
    TTCCTCCAGG TCTTGATCGG GGGTATGTTG TCTTGAATAG ACCATGGGCA 
    TTCGTGCAAT GGCTTGAAAG AGCTACCATC AAGGAAGACT ATGTGCTCAT 
    GGCAGAGCCT GATCATGTAT TTGTTAATCC CCTTCCCAAT TTGGCTGTTG 
    GAGGATTCCC AGCCGCTTTT CCGTTTTTCT ATATTACTCC TGAAAAGTAT 
    GAAAACATAG TCAGAAAGTA TTATCCAGCG GAGATGGGGC CAGTAACAAA 
    TATCGACCCC ATTGGCAACT CTCCTGTTAT CATAAGCAAG GAATCACTTG 
    AAAAGATTGC TCCTACATGG ATGAATGTCT CGCTGACAAT GAAAAACGAT 
    CCAGAAACTG ATAAGGCATT TGGATGGGTG CTGGAAATGT ACGGTTACGC 
    AATTGCATCT GCTATACATG GGGTGCGTCA CATACTTCGG AAGGATTTCA 
    TGCTTCAGCC TCCGTGGGAT TTGTCTACCA AGGGGAAGTT TATCATTCAT 
    TACACTTATG GATGCGACTA CAACATGAAG GGGGAGCTGA CATATGGCAA 
    AATAGGAGAG TGGCGATTCG ATAAGAGATC ACATTTGCGG GGTCCTCCTC 
    CAAGGAACAT GTCCTTGCCG CCTCCCGGTG TTCCCGAAAG TGTGGTGACA 
    CTTGTGAAGA TGGTGAATGA AGCTACTGCG ACTATCCCTA ATTGGGACAC 
    TCTCTAACTC ACATCCACAC ACAAAACACA AACCATAGGG ACAAATCCAT 
    ACAGCAACAA TATTTTGCCT AATTTTTTTT TCCTTCTCCC TTTACTTCCC 
    TTCTTGTCTG TTTTTTCTTG TAATGGTTAA ATTATGAACT TGAGTAGTAA 
    ATTACAAAAT TATTTGTTTG ACT

    Gene models with high sequence identity

    1. AT5G13500.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G13500.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR