F10627

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F10627

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F10627

Determination of introduced cDNA(s)

  • RAFL04-14-F04 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-14-F04 - Resource: pda00400

    full reading [+] show sequence

    Nucleotide sequence: RAFL04-14-F04 - full reading 
    GATTCTGGGT CTGTTGAAAA TCAAAATTTT CTTGAGAACT TTTTTTGAAG 
    AGTTATGATT GCATTAGCTG CTTCTTCGTT GGGGAATACA CCGATTGCTT 
    CGTTTAACCG TCATTTTAGA TTCCGGTTAC ATCCACGAAA CCCTCTGATA 
    CAAGCAGCGG TTTCACCTTC GTCTTCTTCT TCTTCTCCTA CTGCTTCATC 
    TGGCTTTGAT TTGAGTTCTC TCGAATCCGC CATTAACAAG AAAGATAGTA 
    ATGGTGTTAA GGAAGCTCTC GATAAATTGA GTGAAGAAGG TTGGGCTAAG 
    AAATGGAGCT CCCAGCCGTA TCTTTCGCGC CGTACGACAT CACTGCGGGA 
    GCTGACAACT CTCGGTATCA AGAATGCAGA GACTCTGGCC ATCCCTAGTG 
    TCAGGAACGA TGCGGCTTTT CTTTTCACAG TAGTCGGATC AACTGGGTTC 
    ATAGCTGTAC TTGCCGGCCA ACTTCCCGGG GACTGGGGAT TCTTTGTGCC 
    TTACTTAGTT GGGAGCATTT CGTTGGTAGT TTTAGCCGTG GGAAGCGTTT 
    CACCAGGGCT TCTTCAAGCT GCGATTTCCG GGTTTTCGAC GTTCTTCCCT 
    GATTATCAAG AACGAATTGC TGCACATGAA GCAGCCCACT TCTTAGTGGC 
    TTACTTAATC GGGCTTCCAA TCCTCGGGTA CTCGTTAGAC ATCGGTAAAG 
    AACATGTCAA TCTCATTGAC GAGAGACTAG CTAAACTAAT ATACAGCGGC 
    AAGCTTGACT CAAAGGAGCT CGATAGGTTG GCTGCTGTTG CAATGGCTGG 
    ACTTGCCGCC GAGGGTCTGA AGTATGACAA AGTAATTGGC CAATCTGCAG 
    ATCTCTTCTC TCTTCAGAGA TTCATAAACA GAAGCCAACC CAAAATCAGC 
    AACGAGCAGC AGCAAAATCT AACAAGATGG GCTGTTCTTT ACTCTGCTTC 
    TCTTCTCAAA AACAACAAGA CCATCCATGA AGCTCTAATG GCTGCAATGT 
    CCAAAAATGC ATCTGTTCTT GAATGCATTC AAACCATTGA GACAGCTTCC 
    TAGATGAACA ATCTCTGTTA TCTCTTTAAT CGATACAACT ACGTCCCATA 
    ACAACACTCA ATTGTTTCAC ATGAACTTCC ATATCTTTTA TATATATATA 
    TAAAGACACA AAAGTTACAG ACTTCCAAAA AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT2G21960.1 [+] show detail - unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G21960.1

    Model type
    Protein coding
    Computational Description
    unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR