F11041

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11041

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
whole plant flowering stage (PO:0007016)
  • late (PATO:0000693)
    (Adult plant::Flowering::late)
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Adult plant::Growth::slow)
fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Silique::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F11041

Determination of introduced cDNA(s)

  • RAFL14-57-K16 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL14-57-K16 - Resource: pda18802

    full reading [+] show sequence

    Nucleotide sequence: RAFL14-57-K16 - full reading 
    GTCCGGTGTC GCCGTCCTCC ATCGGTTGGT TCCTCTACCA ACGGTGGTTG 
    GCTCTTGTCT AGCTTCTCCG TCGTCCGTCT CCGGCGGTTT AGGCTAGCTT 
    TTGGCCGGAT TTCTTTTTTC GTTTTGTTTT ATGTTCTCGT TTTCTATAGA 
    TCCAGTTTGA TTTTGCTCCT TTGTGTTCTA ACTCTTAGAG GGCTCAATTC 
    CTTGAACCTC CTTTGTTTAA AGGGCTCAAT TTGTTTTTCA AGCTTATCGA 
    TTTCAATTAT ATAAGAACAA ATTAGAGTTG TGGATTGGGG TTTTCTCTAA 
    TGCCTTTGAG TTGGGTTTTA TGCAATTGAG TCAATTGTCA TATTGGTTTT 
    TGGAAACGAG TGTTTTTATT TTACTTTTAG GTGTTCATGG AAGTTTCATT 
    GGCTTAAGTT CTACGCTGAT GTCGTTTGAA GATGATGATA TGACTACCCA 
    GGGGAGATTT TCCTTTGCGA ATTCGAAGAT GAAGAAGATT GATGGGATTC 
    TCTGAATTTT GTGTTGCTCC ATCGGACAAG CTTGAAGTCT TGGTGGTTCC 
    TGGTGGTTTT GGAGTTCCCT GCAATGACTA ACCAAATCGG CGGTGGACTA 
    CATCAATTAC TTCCTAAAAG GGTTTCTTGC TTCAACTGGG CTTTAATTTA 
    GTTGGACTTT TATCTTTATT TTGTTTTTGT CTGGAGACTG AAAGCGGAGG 
    TTTCCACTCT TTTGTAATCT TTACAATCTT TGGTTTAAAT AAGAGACAAC 
    ACTTATGAGC AAAAAAAAAA

    Gene models with high sequence identity

    1. AT5G13560.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); ...
      E-value: 0; Score: 99.74

     

    InterPro Scan Digest

    See the detailed result >

    AT5G13560.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR