F11507

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11507

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F11507

Determination of introduced cDNA(s)

  • RAFL06-81-O19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-81-O19 - Resource: pda03815

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-81-O19 - full reading 
    TGACTTAAAA TTAAATAAAA AGATAGAAGA AAAATAGTGC TTTGAGAAGA 
    AGAAAAAAAA CCGTTGCCCT AGAATTAAAA TCCACTTCTC AGTGTCATAG 
    GCGTCGTCGG TTTGGGAATT TTATAAAGTT GGTCTCTTTT GAATTCATCA 
    GTTTCGTCAT TCTCCTTCAA ATCTGGAAAC CAAAGCGAGT GTGTTTTGCT 
    CTCTTGAATC GAATTTGTAA GCTCGTCGAT TTTGCTTCTT TCCGGGTCGG 
    GTAATCAATT TGATTTGATT CTTCACTCTT CTACAGTGAG CAGAAAATGG 
    AAGCTCTCTA CGCCAAGCTC TACGACAAAT ACACCAAACT CCAGAAGAAG 
    AAATATTCCG AATACGATGA GATTAATAAG GAACAAGAAG AGAAATTCCT 
    TACCTTTGTT TCAGCCTCAG AGGAGTTGAT GGAACATTTG AGAGGTGAAA 
    ATCAGAGTTC TCTGGAGATG GTTGAGAAGT TGAGGAATGA AATCATTTCA 
    ATCAGATCTG GCAGGGACGA CAAGTTTCTG GAGTGTCAAA AGCTTCTCAT 
    GGAAGAAGAA CTAAAGAACA AATCACTTTC TGAAGAAGTT GTCAAGCTAA 
    AAGAGCTGGT CCAAGAGGAA CATCCTCGCA ACTATGAAGA TCAAAGTGGA 
    AAAAAACAAA AGAGAAAGAC TCCTGAAAGT GCTCGAGTTA CAACGAGAAG 
    CATGATAAAA CGTAGCAGAC TGTCAGAAGA TTTGGTGGAA ACGGATATGG 
    TATCACCTGA CATTAGCAAA CATCATAAAG CAAAGGAGCC TCTCTTGGTT 
    TCTCAGCCAC AATGCTGCAG AACAACCTAC GATGGATCAA GTAGTTCTGC 
    TAGTTGTACA TTTCAAGCTC TTGGCAAACA CTTGCTAGGA ATGAAATTAT 
    CAACTAATAA TAAGGGCAAA CGCGCCTGCA TTGTAGCCTC ACACCCAACA 
    ACCGGTTTAT CCTTCAGCCT AACTTTTATA AATAACCCAA ATGGTGAAGA 
    ATCTGAGCTG CTTTACAAGC CTGCATCACT CGGAACATTT CAAAGAGTGG 
    CACCGGAATG GATGAGAGAA GTTATAAAGT TCAGCACAAG TATGTGTCCC 
    ATCTTCTTTG AAAGAGTCTC TCGAGTCATT AAGCTCAATT GTTGATCGGT 
    ACCGTATGTA CATCTCCCTC CCCTTATCTT GTGTAGTCAT CTCTGATGGC 
    TTCTTAGTGT GATGTTTCTC AATAGGTTTG AAAAGCTAGG GAAGTTATCA 
    TTGTATCTAT AGAAATGTGT CTCTCTTTAA CTTTGGAATT AGTTTCAAAG 
    ATAGTGTGTC CTTGTGATGA ATCATATTGT AACAAGATCT TGATTTATCC 
    TTTGCTCTCG ATACCCTCTC CTCTTGTAGA CCTCATAAAT CTCTGATCTA 
    TTGAGCATTT TACATGATTC AACGAAAAAA AAAAAAAAAA

    Gene models with high sequence identity

    1. AT3G20070.1 [+] show detail - titan9
      E-value: 0; Score: 99.93

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT3G20070.1

    Model type
    Protein coding
    Short Description
    titan9
    Curator Summary
    Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information.
    Computational Description
    TITAN9 (TTN9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy, endosperm development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 250 Blast hits to 217 proteins in 63 species: Archae - 0; Bacteria - 52; Metazoa - 53; Fungi - 8; Plants - 43; Viruses - 2; Other Eukaryotes - 92 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR