F11531

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11531

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F11531

Determination of introduced cDNA(s)

  • RAFL06-68-M20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-68-M20 - Resource: pda07624

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-68-M20 - full reading
    CGGATAAGAT CTTCAACCCT GACATATCTG CGAACTTTTA TGTATAGGCA 
    TACTTTCATC CTCACTCATG AAGATAAACA AAAAATCTGG AAAACAGTGG
    AAAAGCTCCT TGTTGACAGC CAAGTAGAGG TACGAGAGCA TGCAGCAGCA
    GTTCTAGCAG GCCTAATGAA AGGAGGAGAT GAAGATTTTG CTGCAGATTT
    TCGTGATAGA TCCTATGCAG AGGCAAACTC AATCCAAAAG AGAAGAAATC
    GGAGGAAATC AAGTTCAACT CAGTCCATTG CGGGGGTGCA TGGAGCCGTT
    CTTGGTTTGG TAGCTTCAGT TTTGTCTGTT CCTTATGACA TGCCCAGCTG
    GCTGCCGGAG CATGTGACCT TACTGGCTCG GTTCGCGGGT GAACCTACAC
    CTATAAAATC GACTGTGACT AAAGCAGTGG CTGAGTTCCG GCGAACCCAT
    GCGGATACAT GGAACATCCA GAAAGACTCA TTCACCGAAG ATCAGCTTGA
    GATCTTGGCC GATACATCTT CCTCTTCCTC GTACTTTGCT TGATTAATGT
    CGAGGAACTG AGTCTCGTCA AAAGACGATA ATACTAAAGT AACTCCACCT
    TTTATTGATT TTTAATTTTG TGCCAAAATA GATGTAATAA TAATAACATG
    AAAGTTATAA AACCATGGTT TCGGTTTATA TATCACAGTG AAAGTTAGAG
    AAAAAAAAAA AAAAAA

    Gene models with high sequence identity

    1. AT3G13330.1 [+] show detail - proteasome activating protein 200
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G13330.1

    Model type
    Protein coding
    Short Description
    proteasome activating protein 200
    Curator Summary
    Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor.
    Computational Description
    proteasome activating protein 200 (PA200); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3437 (InterPro:IPR021843), Armadillo-type fold (InterPro:IPR016024); Has 512 Blast hits to 355 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 262; Plants - 57; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR