F11534

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11534

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F11534

Determination of introduced cDNA(s)

  • RAFL07-11-K15 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL07-11-K15 - Resource: pda09517

    full reading [+] show sequence

    Nucleotide sequence: RAFL07-11-K15 - full reading 
    TTTTTTGCCC GGCGCATATC GACGGGATCT AGTAGATCCG GAACGATGGG 
    GAAAAGAGGA AGGGCTTGTG TAGTGGTACT TGGAGATCTT GGTCGAAGTC 
    CTCGGATGCA ATATCACGCT CTTTCTCTTG CTCGTCAGGC ATCATTTCAA 
    GTGGACATTG TTGCATATGG AGGTTCTATA CCCCATGAAG CTGTTCTAAA 
    TCACCCATCA ATCCACATCC ATACCATGGC GCAGCCTCGA TTCATTCAGT 
    ACTTTCCAAA GATACTTTAT CCTGTAACTC TCTTGCTCAA GGCATTTATT 
    CAGTTTACAA TGCTTCTCTG GTTTCTTTTC GTTAAAGTAC CAGCGCCTGA 
    CATTTTCTTG GTCCAGAATC CTCCTTCCGT CCCAACTCTA ATTGCTGTTA 
    AGTGGGCGAG TTCATGGAGA CGTGCAGCGT TTGTTGTAGA TTGGCATAAT 
    TTTGGATATA CGTTGTTGGC ATTGTCTTTA GGAAGAAACA ATTTGCTTGT 
    ATCCTTATAC CGCTGGTCTG AGAATCATTA TGGAAAGATG GCAACAGGTT 
    CGCTATGTGT CACAAAAGCA ATGCAACATG AACTGGATCA GAATTGGGGT 
    GTGAGAGCCA AAGTGTTATA TGATCAGCCT CCTGAGTTTT TCCGTCCCGC 
    TTTGCTTGAA GAAAGGCATG AGTTGTTTTG CCGAGTGAGG AAGGATCTTT 
    GCCATCCAAT TGGTGTCTAT GATTTCATTA GTAGAGAGTT GGAAAACCAA 
    GAGCTTAATG AAACCCTTTT TACTACCAAA TTTAATGCTG ACATCTCGCT 
    GAAGCAAAAC AGACCAGCTC TTGTTGTGAG TAGTACAAGC TGGACCCCTG 
    ATGAAAATTT TGGTATCCTA CTGGAAGCTG CAGTGATGTA TGATCGGCGT 
    GTGGCTGCAA GATCAAAAGG AAGTGAAACA GCTGAAATTT CAGAAGAGCA 
    ACACCATTAT CCCAATTTGT TGTTCATCAT TACAGGTAAA GGACCTGAAA 
    AGGAGATGTA CGAGGAGAAA ATCAAACGAT TAAACCTTAG ACATGTGGCA 
    TTCCGTACAA TGTGGCTCGC AGCTGAAGAT TACCCATTGC TTTTAGGTTC 
    TGCAGATCTC GGTGTCTGCT TACACACTTC CTCGTCGGGT TTAGACCTTC 
    CCATGAAGGT TGTTGATATG TTTGGATGTG GCCTCCCAGT TTGCTCGGTT 
    TCCTACTCAT GCATTCAAGA ACTCGTTAAA GATGGGAAGA ACGGACTTTT 
    GTTTTCATCT TCATCAGAAT TAGCAGATCA ATTATTGATT CTCTTCAAGG 
    GTTTTCCAGG GAACTGTGAT GCACTAATGT CGCTTAAAGC GGGTGCAATG 
    GAGACTGGTT CTTCGGGTCG ATGGGCTACA GAGTGGGAAG ATTGTGCAAA 
    ACCTTTAATC ACTCAGGTCG TGTCTCAAAT TGCAGATTCA TGAAAGAGAA 
    GACTCAAAAT CGATGGGCTT GAGAGTTTCT CACACAACTG CTTTTGTAGA 
    TCCAAATTTT TATACAAAAT CCTATAGATT ACAAGATTGT CTCGAAAATA 
    TTGACAGAAT CTGAATTCAA AATGGTTTCG CATGAGTCTG TGTATGAATG 
    AGTAAATGAT ATCAAAATCT TTCTTAAC

    Gene models with high sequence identity

    1. AT1G16570.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 4.3e-16
    HMMPfam Glycosyl transferase, group 1 1.1e-10
    HMMPanther BETA1,4 MANNOSYLTRANSFERASE 2.6e-208

    See the detailed result >

    AT1G16570.1

    Model type
    Protein coding
    Short Description
    UDP-Glycosyltransferase superfamily protein
    Computational Description
    UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); Has 834 Blast hits to 816 proteins in 377 species: Archae - 30; Bacteria - 354; Metazoa - 141; Fungi - 141; Plants - 50; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR