F11534

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11534

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F11534

Determination of introduced cDNA(s)

  • RAFL07-11-K15 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL07-11-K15 - Resource: pda09517

    full reading [+] show sequence

    Nucleotide sequence: RAFL07-11-K15 - full reading
    TTTTTTGCCC GGCGCATATC GACGGGATCT AGTAGATCCG GAACGATGGG 
    GAAAAGAGGA AGGGCTTGTG TAGTGGTACT TGGAGATCTT GGTCGAAGTC
    CTCGGATGCA ATATCACGCT CTTTCTCTTG CTCGTCAGGC ATCATTTCAA
    GTGGACATTG TTGCATATGG AGGTTCTATA CCCCATGAAG CTGTTCTAAA
    TCACCCATCA ATCCACATCC ATACCATGGC GCAGCCTCGA TTCATTCAGT
    ACTTTCCAAA GATACTTTAT CCTGTAACTC TCTTGCTCAA GGCATTTATT
    CAGTTTACAA TGCTTCTCTG GTTTCTTTTC GTTAAAGTAC CAGCGCCTGA
    CATTTTCTTG GTCCAGAATC CTCCTTCCGT CCCAACTCTA ATTGCTGTTA
    AGTGGGCGAG TTCATGGAGA CGTGCAGCGT TTGTTGTAGA TTGGCATAAT
    TTTGGATATA CGTTGTTGGC ATTGTCTTTA GGAAGAAACA ATTTGCTTGT
    ATCCTTATAC CGCTGGTCTG AGAATCATTA TGGAAAGATG GCAACAGGTT
    CGCTATGTGT CACAAAAGCA ATGCAACATG AACTGGATCA GAATTGGGGT
    GTGAGAGCCA AAGTGTTATA TGATCAGCCT CCTGAGTTTT TCCGTCCCGC
    TTTGCTTGAA GAAAGGCATG AGTTGTTTTG CCGAGTGAGG AAGGATCTTT
    GCCATCCAAT TGGTGTCTAT GATTTCATTA GTAGAGAGTT GGAAAACCAA
    GAGCTTAATG AAACCCTTTT TACTACCAAA TTTAATGCTG ACATCTCGCT
    GAAGCAAAAC AGACCAGCTC TTGTTGTGAG TAGTACAAGC TGGACCCCTG
    ATGAAAATTT TGGTATCCTA CTGGAAGCTG CAGTGATGTA TGATCGGCGT
    GTGGCTGCAA GATCAAAAGG AAGTGAAACA GCTGAAATTT CAGAAGAGCA
    ACACCATTAT CCCAATTTGT TGTTCATCAT TACAGGTAAA GGACCTGAAA
    AGGAGATGTA CGAGGAGAAA ATCAAACGAT TAAACCTTAG ACATGTGGCA
    TTCCGTACAA TGTGGCTCGC AGCTGAAGAT TACCCATTGC TTTTAGGTTC
    TGCAGATCTC GGTGTCTGCT TACACACTTC CTCGTCGGGT TTAGACCTTC
    CCATGAAGGT TGTTGATATG TTTGGATGTG GCCTCCCAGT TTGCTCGGTT
    TCCTACTCAT GCATTCAAGA ACTCGTTAAA GATGGGAAGA ACGGACTTTT
    GTTTTCATCT TCATCAGAAT TAGCAGATCA ATTATTGATT CTCTTCAAGG
    GTTTTCCAGG GAACTGTGAT GCACTAATGT CGCTTAAAGC GGGTGCAATG
    GAGACTGGTT CTTCGGGTCG ATGGGCTACA GAGTGGGAAG ATTGTGCAAA
    ACCTTTAATC ACTCAGGTCG TGTCTCAAAT TGCAGATTCA TGAAAGAGAA
    GACTCAAAAT CGATGGGCTT GAGAGTTTCT CACACAACTG CTTTTGTAGA
    TCCAAATTTT TATACAAAAT CCTATAGATT ACAAGATTGT CTCGAAAATA
    TTGACAGAAT CTGAATTCAA AATGGTTTCG CATGAGTCTG TGTATGAATG
    AGTAAATGAT ATCAAAATCT TTCTTAAC

    Gene models with high sequence identity

    1. AT1G16570.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 4.3e-16
    HMMPfam Glycosyl transferase, group 1 1.1e-10
    HMMPanther BETA1,4 MANNOSYLTRANSFERASE 2.6e-208

    See the detailed result >

    AT1G16570.1

    Model type
    Protein coding
    Short Description
    UDP-Glycosyltransferase superfamily protein
    Computational Description
    UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); Has 834 Blast hits to 816 proteins in 377 species: Archae - 30; Bacteria - 354; Metazoa - 141; Fungi - 141; Plants - 50; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR