F11542

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F11542

Determination of introduced cDNA(s)

RAFL09-78-H06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-78-H06 - Resource: pda08793

full reading [+] show sequence

AATGGAAATA CACTCCGATG ACTACTTCTT CCTTCCTCCT CCCTGCTTCT 
CCTCCCTCAG CCGCCTTTCT CCGGCGGCGC TTCTTCCGCC ACTCCTGGCT 
TTCCTCTAAG ATCCACCACC GTCTTCCCCA AGTTATGAAT GATTCCACGA 
GGACTGAAGT ATCCATTGAT AAATCAGAAG TAGACAAGCT TGTTGACAAG 
ATTGATTTTG GGGAATTATG CAACGATTTT GAGTGCACAA GTAGTCCGCA 
GGTGGAATCC ACAGCTAGAC AACTTGTTCG CGACATTCTT GAAATCAGAG 
AAGGAAATCG TGCCTTTGCA TGCTATGCAG TTTCCGTTAA ATATAAGGAT 
CCGGTTAGAA GTTTTACAGG TCGTGAGAAG TACAAAAGAC CAATGTGGAT 
AACTAGTGGA TTAGAGAATC CTACCGTGAC GGTACAAGAG ATGGTAATGT 
TATCGACCAG CGTCTTGCGA ATTAAATGGA CAGTGAAAGG AAAACCAAAA 
TCTATTCTTG CTGCTGTAAG TGGAGATTTG ATAGTAAAAG TCAAATCTGA 
ATTTACTCTT AACCAGATTA GTGGGCAAGT GTTTGAGCAT GAAGAGTCTT 
GGGACTTATC TTCATCATCC CCTATTGCTC AAGCCTATTT CTGGACATCC 
CGCCGCCTCT TTGCTGCTTC TGAATCCGCA AAAGATGTCG CCGATGTCAC 
AAAAGACTTG ACCGCCAATT TGACAACTCG AAAAGAGGAC ACAGATATAT 
ATCGCGATCC AACCGATCCA AATAAGTTTT TCCAAAGAGA CAACAGCTTT 
GAGAGAGATG TGTATCAAAT TGCACTGTTT CTAGCCATTG TCTATTTTGT 
TGTACAGTTC TTGAAGAACA CAATCTAGTT ACCTTCTCTC CCATCCTCTA 
TAACAGATAT GTAAATGCCT ATATATTGTT GTATATGATC TGTAAAAAAA 
AACTGAACAA GAAAAGAGAT GTGTTTGTTT GTGTTGGAAG AAAGACT

Gene models with high sequence identity

AT1G65230.1 [+] show detail - Uncharacterized conserved protein (DUF2358)
E-value: 0; Score: 100.00

InterPro Scan Digest

See the detailed result >

AT1G65230.1

Model type: Protein coding
Short Description: Uncharacterized conserved protein (DUF2358)
Computational Description: Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); Has 45 Blast hits to 45 proteins in 18 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR