F11542

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11542

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F11542

Determination of introduced cDNA(s)

  • RAFL09-78-H06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-78-H06 - Resource: pda08793

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-78-H06 - full reading
    AATGGAAATA CACTCCGATG ACTACTTCTT CCTTCCTCCT CCCTGCTTCT 
    CCTCCCTCAG CCGCCTTTCT CCGGCGGCGC TTCTTCCGCC ACTCCTGGCT
    TTCCTCTAAG ATCCACCACC GTCTTCCCCA AGTTATGAAT GATTCCACGA
    GGACTGAAGT ATCCATTGAT AAATCAGAAG TAGACAAGCT TGTTGACAAG
    ATTGATTTTG GGGAATTATG CAACGATTTT GAGTGCACAA GTAGTCCGCA
    GGTGGAATCC ACAGCTAGAC AACTTGTTCG CGACATTCTT GAAATCAGAG
    AAGGAAATCG TGCCTTTGCA TGCTATGCAG TTTCCGTTAA ATATAAGGAT
    CCGGTTAGAA GTTTTACAGG TCGTGAGAAG TACAAAAGAC CAATGTGGAT
    AACTAGTGGA TTAGAGAATC CTACCGTGAC GGTACAAGAG ATGGTAATGT
    TATCGACCAG CGTCTTGCGA ATTAAATGGA CAGTGAAAGG AAAACCAAAA
    TCTATTCTTG CTGCTGTAAG TGGAGATTTG ATAGTAAAAG TCAAATCTGA
    ATTTACTCTT AACCAGATTA GTGGGCAAGT GTTTGAGCAT GAAGAGTCTT
    GGGACTTATC TTCATCATCC CCTATTGCTC AAGCCTATTT CTGGACATCC
    CGCCGCCTCT TTGCTGCTTC TGAATCCGCA AAAGATGTCG CCGATGTCAC
    AAAAGACTTG ACCGCCAATT TGACAACTCG AAAAGAGGAC ACAGATATAT
    ATCGCGATCC AACCGATCCA AATAAGTTTT TCCAAAGAGA CAACAGCTTT
    GAGAGAGATG TGTATCAAAT TGCACTGTTT CTAGCCATTG TCTATTTTGT
    TGTACAGTTC TTGAAGAACA CAATCTAGTT ACCTTCTCTC CCATCCTCTA
    TAACAGATAT GTAAATGCCT ATATATTGTT GTATATGATC TGTAAAAAAA
    AACTGAACAA GAAAAGAGAT GTGTTTGTTT GTGTTGGAAG AAAGACT

    Gene models with high sequence identity

    1. AT1G65230.1 [+] show detail - Uncharacterized conserved protein (DUF2358)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G65230.1

    Model type
    Protein coding
    Short Description
    Uncharacterized conserved protein (DUF2358)
    Computational Description
    Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); Has 45 Blast hits to 45 proteins in 18 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR