F11545

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11545

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F11545

Determination of introduced cDNA(s)

  • RAFL06-74-C05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-74-C05 - Resource: pda03472

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-74-C05 - full reading 
    ATTCCATTTC GTATTTTTCT CTTCTTCCTC TTCTGAAAAA TTAGGGTTTG 
    AGTTCTTCTT CTAATCGATC AGAAAGATGG GTGGAGGAAA CGCACAGAAA 
    TCAGCCATGG CTCGTGCCAA AAACTTGGAG AAGGCTAAGG CTGCAGGAAA 
    AGGTAGCCAA TTGGAAGCTA ACAAGAAAGC TATGTCGATT CAGTGCAAGG 
    TTTGTATGCA AACATTCATC TGCACGACAT CGGAAGTGAA ATGCAGGGAG 
    CACGCGGAGG CGAAGCATCC GAAAGCCGAT GTTGTCGCTT GTTTCCCTCA 
    CCTCAAGAAG TGATGAAAGC TATTATCTCA ACTATAAAGG ATTCCAATGT 
    ATAACGTATG GATCCTCATC TTTCCTATGT TTGTATCAAA GTCTCGACAA 
    ATTTTATGGT TTCTATTTCT CTCTACTTGT TTCAACAATA AGTCTCTTGC 
    TATGATTATA TAATGAAGCT TTGTGTGGAT

    Gene models with high sequence identity

    1. AT2G23090.1 [+] show detail - Uncharacterised protein family SERF
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Uncharacterised protein family SERF 9.9e-14
    Gene3D no description 4.3e-28

    See the detailed result >

    AT2G23090.1

    Model type
    Protein coding
    Short Description
    Uncharacterised protein family SERF
    Computational Description
    Uncharacterised protein family SERF; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family SERF (InterPro:IPR007513); Has 164 Blast hits to 164 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 42; Plants - 89; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR