F11914

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11914

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F11914

Determination of introduced cDNA(s)

RAFL09-31-E09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-31-E09 - Resource: pda05840

full reading [+] show sequence

ATCCGCCGGA AAATTCGTAA ATTTGACCCT TCGTCTTCGG AAATGGCGGC 
TATTTCTCCG GCGAATGCAA CCACCGCTGC TTCACTCTCC CTGCCTCAAT 
TTAGCTCAAC TTCTTCCTCG TTATCTTCTT CTTCGTCTCC ATCGTTTCTT 
AATTTCAAAA CTGCTTCAGT CAGTAATCGC TGCATCAAGT GCGGAGTCAG 
AAGCTTAGAG AACCACTCTG GTCACCGGAG CCTCGATTTC TTATCCAATG 
GGGATCCGAT CAGCCTAATT AATCCGAATT CATCGTCTCC TATAACCATG 
GCCGCGGCGA CGTCGGAATC CGGTTCGAAG AGCTCTAAGC GCGTCTGTCT 
CTTCCACAGC GACGAGACTA GAGATCTCGC CGAGAGAATC GTCGCAAAAT 
CTGATTGCAT TGAGCTACGA AGCATCAATT GGAAGAAATT TGATGATGGA 
TTCCCTAATT TGTTCATACA AAATGCTCAA GGCATTCGTG GGCAGCATGT 
TGCTTTCTTG GCTTCATTCA GTTCACCTGC TGTGATCTTC GAGCAGCTTT 
CGGTTATTTA TGCTCTGCCT AAGCTTTTTG TTTCTTCGTT TACACTTGTT 
CTTCCATTCT TTCCTACTGG AACTTCTGAG AGAATGGAAG ACGAAGGAGA 
TGTGGCCACT GCTTTTACTC TCGCTAGGAT ACTCTCTAAT ATTCCGACTT 
CGAGAGGAGG ACCGACTAGC CTAGTGACCT TCGATATACA TGCCTTGCAG 
GAAAGATTCT ACTTTGGTGA TACTATACTT CCATGCTTTG AAAGTGGTAT 
ACCATTGCTC AAGAGCAGAC TCCAGAGTCT ACCTGATTCT GATAACATAT 
CTATTGCATT CCCAGATGAT GGAGCATGGA AGCGTTTCCA CAAGCAACTC 
CAACATTATC CAACGATTGT TTGCAACAAA GTAAGAATGG GAGACAAACG 
AATAGTGCGT ATCAAAGAGG GAGACGCTGA AGGAAGGCAC GTCGTGATTG 
TTGATGATTT GGTTCAGTCG GGTGGCACAT TAATCGAATG CCAGAAAGTC 
TTAGCTGCAC ATGGAGCAGC GAAGATAAGC GCATATGTAA CACACGGGAT 
CTTCCCCAGG AGTTCATGGA AACGTTTCAA GCTTGACACC AAAGGTGATC 
CCGCGGAAGG TCTGAGCTAT TTCTGGATCA CAGACTCGTG TGGGATGACT 
GTGAAAGAGG TGATGAATAA ACCTCCTTTT GAAGTTCTTA GCCTGGCTGG 
CTCCATAGCT TCTGCTCTTC AAGTTTAAGC TTATGTGATT CGAGAAGAAA 
TCCAGCCGCA AGTAATTTTT GGGTTTGAAC AAATCTGATT TATAAACTTT 
GGTGTATAGT TCTCGATCAA AGCATTTTCC ACGGAAGAGG TTATTTGTTG 
TTAATGTTCT GTAGGAAAAT CCAATAATGT AATAATGTTT CTTCTGTCAA 
AGAGAGAAAA AAAAAACAAT GTTTCATTTC ACTTCTTTTA TACTTGTTGA 
TAGACAGG

Gene models with high sequence identity

AT1G10700.1 [+] show detail - phosphoribosyl pyrophosphate (PRPP) synthase 3
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE-RELATED	0
HMMPanther	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE	0
HMMPfam	Phosphoribosyltransferase	8.9e-08
superfamily	PRTase-like	3.1e-21
superfamily	PRTase-like	1e-16
HMMTigr	Phosphoribosyl pyrophosphokinase	1.7e-21
Gene3D	no description	3.8e-06
Gene3D	no description	1.4e-18

See the detailed result >

AT1G10700.1

Model type: Protein coding
Short Description: phosphoribosyl pyrophosphate (PRPP) synthase 3
Curator Summary: Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.
Computational Description: phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink).
Link: InterPro Scan - TAIR