F12114

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F12114

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F12114

Determination of introduced cDNA(s)

  • RAFL04-09-I24 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-09-I24 - Resource: pda02290

    full reading [+] show sequence

    Nucleotide sequence: RAFL04-09-I24 - full reading
    TGGAGAAATG TCAGAGATAG AAGAAGAAGA AGAAGAAGGA TCAGCAAGTG 
    CAATTACAGG TTCGAGAAGT TTCGATCTTC CCGATGAACT TCTTCAAGTT
    CTACCGTCCG ATCCATTCGA GCAGCTAGAT GTAGCTCGCA AAATCACATC
    CATTGCTCTC TCGACACGTG TCTCAGCTCT CGAATCAGAG TCGTCGGATC
    TCCGGGAACT TCTCGCCGAG AAAGAAAAAG AATTTGAAGA ACTCCAGTCT
    CACGTTGAGT CTCTCGAGGC TTCTCTTTCC GATGCGTTTC ATAAGCTTTC
    TCTCGCTGAT GGTGAAAAGG AGAATCTGAT AAGAGAAAAT GCTTCTTTGT
    CTAATACTGT CAAGAGACTT CAGAGAGATG TCTCAAAGCT TGAGGGTTTT
    AGGAAGACGC TTATGATGTC TCTTCAAGAT GATGACCAAA ATGCAGGAAC
    AACGCAAATC ATCGCTAAGC CGACACCAAA CGATGATGAT ACTCCATTTC
    AACCTTCAAG ACATTCATCA ATCCAATCTC AACAAGCTTC TGAAGCCATT
    GAACCAGCTG CAACTGACAA CGAAAACGAT GCTCCTAAAC CAAGTTTATC
    AGCTAGTCTT CCGTTAGTAT CACAAACTAC TACGCCACGG CTTACTCCTC
    CTGGTTCTCC ACCAATCTTA TCTGCTTCTG GTACACCGAA AACAACTTCG
    AGACCTATCT CTCCTCGACG CCATTCTGTA TCGTTCGCTA CCACTAGAGG
    CATGTTTGAT GATACTAGAT CTTCTATTTC AATCTCAGAG CCTGGTTCAC
    AAACTGCGAG AACTCGGGTT GATGGAAAAG AGTTCTTTCG ACAAGTCAGG
    AGCCGATTAT CTTACGAGCA ATTTGGTGCA TTTCTTGGAA ATGTGAAGGA
    TCTTAACGCC CACAAGCAAA CAAGAGAAGA AACACTTAGG AAAGCTGAAG
    AGATATTTGG AGGCGATAAC AGAGATCTCT ACGTCATATT CGAGGGCTTG
    ATCACACGCA ACGCTCACTA AGAGTTTGGC TTCTTCAGTT ACACAAAGAA
    CTTATATACT CGGAAACTCA GGATTCATCA GTCTGCAACA TTCAATTTCT
    TTTGTTTCCT TGGCTGTCAA GTAAGACCAA GTAAAACTGA CAATTTGATT
    GTATCATTTG TGCTCTCTCG TGTATCTATC TATCTCTCTC TTCTTGAATA
    AATTACATTT CATC

    Gene models with high sequence identity

    1. AT4G15545.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT4G15545.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR