F12114

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F12114

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F12114

Determination of introduced cDNA(s)

  • RAFL04-09-I24 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-09-I24 - Resource: pda02290

    full reading [+] show sequence

    Nucleotide sequence: RAFL04-09-I24 - full reading 
    TGGAGAAATG TCAGAGATAG AAGAAGAAGA AGAAGAAGGA TCAGCAAGTG 
    CAATTACAGG TTCGAGAAGT TTCGATCTTC CCGATGAACT TCTTCAAGTT 
    CTACCGTCCG ATCCATTCGA GCAGCTAGAT GTAGCTCGCA AAATCACATC 
    CATTGCTCTC TCGACACGTG TCTCAGCTCT CGAATCAGAG TCGTCGGATC 
    TCCGGGAACT TCTCGCCGAG AAAGAAAAAG AATTTGAAGA ACTCCAGTCT 
    CACGTTGAGT CTCTCGAGGC TTCTCTTTCC GATGCGTTTC ATAAGCTTTC 
    TCTCGCTGAT GGTGAAAAGG AGAATCTGAT AAGAGAAAAT GCTTCTTTGT 
    CTAATACTGT CAAGAGACTT CAGAGAGATG TCTCAAAGCT TGAGGGTTTT 
    AGGAAGACGC TTATGATGTC TCTTCAAGAT GATGACCAAA ATGCAGGAAC 
    AACGCAAATC ATCGCTAAGC CGACACCAAA CGATGATGAT ACTCCATTTC 
    AACCTTCAAG ACATTCATCA ATCCAATCTC AACAAGCTTC TGAAGCCATT 
    GAACCAGCTG CAACTGACAA CGAAAACGAT GCTCCTAAAC CAAGTTTATC 
    AGCTAGTCTT CCGTTAGTAT CACAAACTAC TACGCCACGG CTTACTCCTC 
    CTGGTTCTCC ACCAATCTTA TCTGCTTCTG GTACACCGAA AACAACTTCG 
    AGACCTATCT CTCCTCGACG CCATTCTGTA TCGTTCGCTA CCACTAGAGG 
    CATGTTTGAT GATACTAGAT CTTCTATTTC AATCTCAGAG CCTGGTTCAC 
    AAACTGCGAG AACTCGGGTT GATGGAAAAG AGTTCTTTCG ACAAGTCAGG 
    AGCCGATTAT CTTACGAGCA ATTTGGTGCA TTTCTTGGAA ATGTGAAGGA 
    TCTTAACGCC CACAAGCAAA CAAGAGAAGA AACACTTAGG AAAGCTGAAG 
    AGATATTTGG AGGCGATAAC AGAGATCTCT ACGTCATATT CGAGGGCTTG 
    ATCACACGCA ACGCTCACTA AGAGTTTGGC TTCTTCAGTT ACACAAAGAA 
    CTTATATACT CGGAAACTCA GGATTCATCA GTCTGCAACA TTCAATTTCT 
    TTTGTTTCCT TGGCTGTCAA GTAAGACCAA GTAAAACTGA CAATTTGATT 
    GTATCATTTG TGCTCTCTCG TGTATCTATC TATCTCTCTC TTCTTGAATA 
    AATTACATTT CATC

    Gene models with high sequence identity

    1. AT4G15545.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT4G15545.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR