F12128

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F12128

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F12128

Determination of introduced cDNA(s)

  • RAFL04-14-F04 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-14-F04 - Resource: pda00400

    full reading [+] show sequence

    Nucleotide sequence: RAFL04-14-F04 - full reading
    GATTCTGGGT CTGTTGAAAA TCAAAATTTT CTTGAGAACT TTTTTTGAAG 
    AGTTATGATT GCATTAGCTG CTTCTTCGTT GGGGAATACA CCGATTGCTT
    CGTTTAACCG TCATTTTAGA TTCCGGTTAC ATCCACGAAA CCCTCTGATA
    CAAGCAGCGG TTTCACCTTC GTCTTCTTCT TCTTCTCCTA CTGCTTCATC
    TGGCTTTGAT TTGAGTTCTC TCGAATCCGC CATTAACAAG AAAGATAGTA
    ATGGTGTTAA GGAAGCTCTC GATAAATTGA GTGAAGAAGG TTGGGCTAAG
    AAATGGAGCT CCCAGCCGTA TCTTTCGCGC CGTACGACAT CACTGCGGGA
    GCTGACAACT CTCGGTATCA AGAATGCAGA GACTCTGGCC ATCCCTAGTG
    TCAGGAACGA TGCGGCTTTT CTTTTCACAG TAGTCGGATC AACTGGGTTC
    ATAGCTGTAC TTGCCGGCCA ACTTCCCGGG GACTGGGGAT TCTTTGTGCC
    TTACTTAGTT GGGAGCATTT CGTTGGTAGT TTTAGCCGTG GGAAGCGTTT
    CACCAGGGCT TCTTCAAGCT GCGATTTCCG GGTTTTCGAC GTTCTTCCCT
    GATTATCAAG AACGAATTGC TGCACATGAA GCAGCCCACT TCTTAGTGGC
    TTACTTAATC GGGCTTCCAA TCCTCGGGTA CTCGTTAGAC ATCGGTAAAG
    AACATGTCAA TCTCATTGAC GAGAGACTAG CTAAACTAAT ATACAGCGGC
    AAGCTTGACT CAAAGGAGCT CGATAGGTTG GCTGCTGTTG CAATGGCTGG
    ACTTGCCGCC GAGGGTCTGA AGTATGACAA AGTAATTGGC CAATCTGCAG
    ATCTCTTCTC TCTTCAGAGA TTCATAAACA GAAGCCAACC CAAAATCAGC
    AACGAGCAGC AGCAAAATCT AACAAGATGG GCTGTTCTTT ACTCTGCTTC
    TCTTCTCAAA AACAACAAGA CCATCCATGA AGCTCTAATG GCTGCAATGT
    CCAAAAATGC ATCTGTTCTT GAATGCATTC AAACCATTGA GACAGCTTCC
    TAGATGAACA ATCTCTGTTA TCTCTTTAAT CGATACAACT ACGTCCCATA
    ACAACACTCA ATTGTTTCAC ATGAACTTCC ATATCTTTTA TATATATATA
    TAAAGACACA AAAGTTACAG ACTTCCAAAA AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT2G21960.1 [+] show detail - unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G21960.1

    Model type
    Protein coding
    Computational Description
    unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR