F12619

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F12619

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F12619

Determination of introduced cDNA(s)

  • RAFL05-18-K13 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-18-K13 - Resource: pda07413

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-18-K13 - full reading 
    AAATCAAAAT GGTGGATGCG GCGGAGCAAC CACCTTCTAC CTCCGAGGGA 
    GAAAGCCTCC TCAAGATCCA CATTGAGAGG ATGCATAAGA AGCTGAAGGA 
    ACCACCACGG TTGCTCAGTT CGGCCGCCGG GAAACCTACT TGCTCCATCT 
    TCCGGGTACC TCAGAGCATG ATTGATTGTA ATGGAAGATG CTATGAGCCA 
    CGAGTGGTCT CGATTGGACC GTACCACCGT GGCCAAACAC AACTCAAAAT 
    GATTGAAGAA CACAAATGGC GTTACCTAAA CGTTCTGCTC ACTAGAACCC 
    AAAACCTAAC TCTAGAGGAT TACATGAAGA GCGTGAAGAA CGTTGAGGAA 
    GTGGCGAGAG AATGTTACTC CGAGACAATC CACATGGACT CGGAAGAGTT 
    CAACGAGATG ATGGTTCTTG ACGGTTGCTT TCTCCTTGAG CTGTTTCGCA 
    AAGTGAACAA TCTTGTTCCT TTCGAACCAA ACGATCCACT TGTGGCCATG 
    GCTTGGGTTC TTCCTTTCTT CTACAGAGAT TTTCTCTGTC TTGAGAATCA 
    AATCCCTTTC TTCGTTCTAG AAACTTTGTT CAATCTCACA AGAGGAGACA 
    ACGAAAACGA GACAAACGCT TCTTTACAAT CTCTAGCGTT TGCGTTTTTC 
    AACAACATGA TGCACAGAAC AGAGGAAGAT CTCGCCAGGT TCAAAGAGCT 
    AAGAGCCAAA CACCTCCTCG ACCTCCTCCG GTCAAGTTTC ATCCCGGAGA 
    GTGAGCTTCA CACGCCGCCG GCAACGAATC CAGGGAAGGA AAAGATGCCG 
    TCCCACATTA TCCACAGCAT TTCGAAGCTC CGGCGAGCCG GGATCAAACT 
    CCGAGAGCTG AAAGACGCAG AGAGCTTCTT AGTGGTGAGA TTCAGACACG 
    GGACCATCGA GATGCCGGCG ATCACCGTCG ACGATTTCAT GAGCAGTTTC 
    TTAGAGAACT GCGTGGCATA CGAGCAATGC CACGTGGCGT GCTCAATGCA 
    TTTCACGACA TACGCGACGC TCCTAGATTG TCTGACGAAT ACTTACAAGG 
    ACGTTGAGTA TCTATGCGAC CAAAACATCA TAGAAAACTA TTTCGGAACA 
    GATACAGAGC TGGCGAAATT CGTGAACAGT TTAGGCAGAG ATGTGGCGTT 
    CGACATAACA CAGTGTTATC TCAAAGACTT GTTTGAAGAA GTGAATGAGT 
    ATTACAAGAG TAGTTGGCAC GTGGAATGGG CTACTTTCAA ATTCACTTAC 
    TTTAACTCTC CTTGGTCTTT TGTCTCTGCT CTTGCTGCTC TTGTTCTTTT 
    GGTCTTGTCC GTTATCCAGA CTATTTACAC TGTTTTCCAG GCTTATCAAA 
    AATAAATTTT TCAACCTTTT CATTATTAAA AAAAAAAAAA AAAAAAA

    Gene models with high sequence identity

    1. AT2G36430.1 [+] show detail - Plant protein of unknown function (DUF247)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G36430.1

    Model type
    Protein coding
    Short Description
    Plant protein of unknown function (DUF247)
    Computational Description
    Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G22550.2); Has 1137 Blast hits to 1027 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR