F12626

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F12626

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F12626

Determination of introduced cDNA(s)

  • RAFL09-27-O19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-27-O19 - Resource: pda08142

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-27-O19 - full reading 
    AAAAAAGCAG AGCTCACACT TAGAAAACAA AAAACAAAAA TGGCTACGCT 
    TTCGTTTGGA ATCGCCGCCG CTGCAACCAC CGTCCGTACG ATTCCGAGAT 
    TTAATTCACG GAGGAGCAAA ATCACATGCG AATGGGATCC GAAAGGTGTG 
    TTGGGTCCGG CTCAAACTGG TCATATAGCT CGGCTTGAGT TTAAGCGTCG 
    GCTAGAGAGA GATTCAGAGG CAAGAGAAGC TTTTCAGAAA CAACTTCGTG 
    AAGAGAAAGA GCGTCGTCAA GCTCTTAGAC AATCTAGAGT TGTACCGGAT 
    ACTGCTGCGG AGCTGATTGA GTACTTTCTT GATACTGAAG CTCAGGAGAT 
    TGAGTATGAG ATCGCTAGGC TTAGAGGAAG GTTAAACGAC GAATTCTTTG 
    CGCAGATACG ACTTGAAATC GGACAGATTC GATTTGCTGT TACTAAGACT 
    GCGGATATTG AAGATAGATT GATTGAGCTT GAAACACTTC AAAAAGCTTT 
    AGAAGAAGGA ATAGAGGCTT ATGACAAAAT GCAAAATGAG CTTATGACGG 
    CTACAAATAG CTTAACCAAA CTCTTAACCT CAACCGATAT AAAAACCACA 
    TTGTTGGATA TGGTGGAGAA AAACCAAATC AACAGATCTT TGTTGGCACT 
    TCTCGACGAA AACATAGCCA ATGCATACAA AGGAAACCAG AAAGAAGCAG 
    GAGATTACAT GGAGAAGATA CGCTCTTCAG TTCTTAAGTA TTTGACAGTG 
    TAGGATCATA TGAGTCTTCG AAAGATTTCT CAAGCTTTTG AATGTTTTCT 
    ATTATCGGGG AAAATTGTAT TTATATTTTT GTTTGTTGAG TAAAATGTAT 
    TTTCTTTTTT TCCGAACGAT GTTTATATTT TTAGGGTCAT TTCAGATCTT 
    CAAGTAATAA AAAGAATTTA AT

    Gene models with high sequence identity

    1. AT1G62780.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT1G62780.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR