F12935

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F12935

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F12935

Determination of introduced cDNA(s)

  • RAFL05-01-O08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-01-O08 - Resource: pda00878

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-01-O08 - full reading 
    TCCGGAGGAG CGACCAATAA GAGCGCGAGG AGCTTCCACG TGTTACTACA 
    CGAATCTTGT TTAGTAAAAA GCGCAGCTGC AAAAAAAATC GAGTAGAGAA 
    GAAGTAGGCA GACAAAGAAG AAGAAGAAGA AGTTCTCGGC GTGCTTCAAT 
    GGCGATATCA GTAGCAGCTT CGTCCTCTAT GGCCGTGATG GTTCCACGTG 
    TTCCCGCCGT ATCCACCCGT TGCTCCGCCG TCCCTTATCT TCCTCCTCGC 
    TCCTTTGGCC GATCCTCTTT CACCGTTCCG TTGAAGCTTG TTTCAGGGAA 
    TGGATTGCAA AAAGTTGAAT TGTTGAAGAC AAGAGCTTCT TCAGAAGAGA 
    CCTCGTCCAT TGATACCAAC GAACTCATCA CAGATTTGAA GGAAAAGTGG 
    GATGGTCTTG AGAACAAATC TACTGTACTT ATATATGGAG GAGGAGCCAT 
    TGTTGCTGTT TGGTTATCTT CCATTGTTGT TGGTGCCATC AACTCTGTTC 
    CTCTGCTTCC GAAAGTTATG GAACTTGTCG GTCTCGGGTA CACTGGATGG 
    TTTGTCTACA GATACCTTCT CTTCAAGTCA AGCAGAAAGG AATTGGCTGA 
    GGATATTGAA TCCTTGAAGA AGAAGATCGC AGGAAGCGAA TAGATTCATT 
    TTCAAATAAA ACCAGCTTTC TCTCTGTATG TTTTCCTGTA ATATCGTGTT 
    ATATTATACA ATGTCTCTGT TTCAACATTG TATCTGTTGC ATCTGAAACT 
    ATTATCTTGG ATCCG

    Gene models with high sequence identity

    1. AT4G01150.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G01150.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR