F13139

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F13139

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F13139

Determination of introduced cDNA(s)

  • RAFL09-22-L12 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-22-L12 - Resource: pda05659

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-22-L12 - full reading 
    ATTGCAATTT GCAAACATGG CGCTCGCGCT CTCGCTGTCG GCATGTTCTC 
    CTCCACTCCG CCGCACTCGT CGTGCCGGTT TTCGAACAAG CTGCTCGATC 
    TTCGCGAATC CAGCACAGCG AGCCAAGAGG AAGCTGCTTG AGCTGATCTC 
    CGAGGAGGAT CGAGGTCTGA GAACCCAGAA AGACCCCAAG AAGCGAGATG 
    AAATCGTGAA CGCCATCGAA TCCATGACGG TTATCGGGCG CAGCTCCATC 
    ACCACAGACG ACTCTCTATC TGCCACGTGG CGGCTCTTGT GGACGACGGA 
    GAAGGAACAG TTGTTCATCA TAGAAAAGGC AGGCTTGTTT GGGACGACCG 
    CCGGAGACGT TTTGCAGGTG ATCGATGTGA ATAAACGGAT CCTCAATAAC 
    GTCATCACTT TCCCGCCGGA CGGGGTTTTC TTCGTACGCT CCGATATCGA 
    TATCGCTTCC CCGCAGAGAG TCAATTTCAG ATTCAATAGT GCGGTATTGA 
    GAGGGAAGAA CTGGGAGCTC CCACTGCCAC CATTTGGGAA GGGCTGGTTT 
    GAGAATGTGT ATATGGACGG TGAGATCAGA GTGGCCAAGG ACATCAGAGG 
    AGACTACTTA ATTGTTGATC GTGCTCCTTA TAACTGGACT GAATCATTTG 
    TATAATTTGT GATGCTTTTT GCTTCTTGTA TAAGTTATAC ACCATTTCTG 
    CC

    Gene models with high sequence identity

    1. AT4G00030.1 [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G00030.1

    Model type
    Protein coding
    Short Description
    Plastid-lipid associated protein PAP / fibrillin family protein
    Computational Description
    Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR