F13650

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	epinastic (PATO:0000945) (Cauline leaf::Shape::epinastic)
	rosette leaf (PO:0000014)	epinastic (PATO:0000945) (Rosette leaf::Shape::epinastic) variegated (PATO:0000335) (Rosette leaf::Color::variegated) abnormal (PATO:0000460) (Rosette leaf::Others)
	whole plant flowering stage (PO:0007016)	late (PATO:0000693) (Adult plant::Flowering::late)
	root (PO:0009005)	present in greater numbers in organism (PATO:0000470) (Root::Number::many)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F13650

Determination of introduced cDNA(s)

RAFL06-16-N18 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-16-N18 - Resource: pda07595

full reading [+] show sequence

ATCTTCTAAG AAAGAAACAA AGAAAGACTT CACATTTTAC CATTATTTGC 
TCTGAGCTCA GTAGGAGAGT TCAAGAAACA ATGGCAAAGA TGCAATTATC 
AATCTTTATC GCTGTCGTTG CGCTTATCGT CTGCTCTGCA TCTGCTAAAA 
CCGCAAGCCC TCCAGCTCCA GTGCTGCCAC CGACACCAGC TCCAGCACCA 
GCCCCGGAAA ATGTGAATCT CACCGAGCTT TTAAGTGTAG CTGGTCCGTT 
CCACACATTC CTCGACTACC TTCTCTCGAC TGGAGTCATT GAGACTTTCC 
AAAACCAAGC TAACAACACT GAGGAAGGCA TCACAATCTT TGTCCCTAAA 
GATGATGCTT TCAAAGCTCA GAAGAATCCT CCTTTGTCAA ATCTCACAAA 
GGATCAGCTT AAGCAGCTTG TTCTCTTCCA TGCTCTGCCT CATTACTATT 
CGCTTTCGGA ATTCAAGAAC TTGAGCCAAT CTGGTCCAGT GAGCACCTTT 
GCTGGTGGTC AATACTCCTT GAAATTCACT GATGTTTCTG GCACGGTTAG 
GATTGATTCT TTATGGACCA GGACTAAAGT CAGCAGCAGT GTTTTCTCCA 
CTGACCCTGT TGCGGTTTAC CAAGTGAACC GCGTGCTTCT ACCCGAAGCA 
ATCTTTGGTA CTGATGTCCC TCCAATGCCT GCTCCAGCTC CTGCTCCTAT 
CGTTAGTGCT CCTTCGGATT CTCCTTCAGT TGCTGATTCT GAAGGAGCTT 
CTTCACCAAA GTCCTCACAC AAGAACTCCG GACAAAAGCT GCTACTTGCA 
CCAATCTCCA TGGTTATTTC CGGTTTGGTG GCATTGTTCT TGTGATCAGA 
TGGTTTTGCA GATTGAGTTA TGTTTTTAAG TTACAATGTG AAAGATTGTA 
TTACATCATT TGAATTGTCT TTTTGATTTT TGAAACCCAT TTTTTATTAT 
ACATTTTTAT CATCG

Gene models with high sequence identity

AT2G04780.1 [+] show detail - FASCICLIN-like arabinoogalactan 7
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	FAS1 domain	3e-24
superfamily	FAS1 domain	1.8e-26
ProfileScan	FAS1 domain	19.747
HMMPfam	FAS1 domain	8.3e-22

See the detailed result >

AT2G04780.1

Model type: Protein coding
Short Description: FASCICLIN-like arabinoogalactan 7
Curator Summary: fasciclin-like arabinogalactan-protein 7 (Fla7)
Computational Description: FASCICLIN-like arabinoogalactan 7 (FLA7); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan 6 (TAIR:AT2G20520.1); Has 713 Blast hits to 707 proteins in 79 species: Archae - 4; Bacteria - 65; Metazoa - 1; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link: InterPro Scan - TAIR