F13738

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F13738

Determination of introduced cDNA(s)

RAFL06-69-O11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-69-O11 - Resource: pda03333

full reading [+] show sequence

ACACCAAACC TCTCTCTCTA TCTCTGTCCA AATAAGAACA AAAAAAGACA 
AGATTCAGAA AAAAATGGAG GTTTCGATGA GAAAGCCTTA TTTCATAGAA 
GAAGAAGACG ATGGTTTTGT TTCTTTATCT GAGATGGAAG CTGGAGTTTC 
AAGTCCTTCT TGTTACAACT ATCCTCAGAG TTATTATTAT AACCATCATC 
ATCATCAGTA CTCTGTTTCA TCTCCCAGAT CTGGAAAATT TCATGATTTT 
AGATTCGACA ATAGCTATTA CGGTTATGGA CAGCCTCATT TCTTGGACTC 
TTGCTTCCTC TGCAAGAAAC GTCTTGGTGA TAACAGAGAC ATCTTCATGT 
ACAGAGGAGA CACACCGTTC TGTAGTGAAG AGTGTAGAGA AGAACAGATA 
GAAAGAGACG AAGCAAAAGA GAAGAAACAG AGTCTGTCTA CATCTGTGAA 
AGCTATGAGA AGAAATGAAA AGCGAAGCTC TTCTTCTTCT CCAACTAGAT 
CTCGTAACTA TGCTTTCCGC ACTGGAACTG TTGCTGCTGC CTAATTTAAA 
GTTATAAAGG AAAAAAAGGG AGATAGAGAA TCCATTAACG CTCATATTGC 
TGTAAAAGCT AGTTAATGGA TTTATGGGTT TTTTCTTCAT CTAAAGATCT 
TTCTTTAGTT TGAATTTGAA TACTAAACCA AAAAAAAAAT GGTTAGGGAA 
AAAGAAAAAA AAAAAAGCGA AGAAACCTCT CTTTTTTTAA AGGGTTTGTC 
CTTTCTTTGT TTTATTTTCA TGTTTATTAG TTTTGTTTTT CTTGAAGAAA 
AATATATATA TGCAATTTTG GGTGCAAAAA AAAAAAAAAA

Gene models with high sequence identity

AT4G17670.1 [+] show detail - Protein of unknown function (DUF581)
E-value: 0; Score: 99.64

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
HMMPfam	Protein of unknown function DUF581	7.4e-26

See the detailed result >

AT4G17670.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF581)
Computational Description: Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR