F13814

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F13814

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F13814

Determination of introduced cDNA(s)

  • RAFL05-07-O05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-07-O05 - Resource: pda01080

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-07-O05 - full reading 
    AAAAGAGAGA AAGAAAAAAA AGCTCAAAGA ACTCAGAAGA AGAAGAAAGA 
    TGTATCATCA AGAACAACAT CCTGTCGGTG CTCCTCCTCC CCAAGGGTAT 
    CCACCTAAGG ACGGTTATCC TCCGGCCGGT TATCCTCCAG CCGGTTATCC 
    ACCGCCAGGA TATGCTCAGG GATACCCTGC ACAAGGTTAT CCTCCGCCGC 
    AGTACTCTCA AGCTCCGCAG CAGAAGCAAA ACGCCGGTAT GCTTGAAGGA 
    TGTTTGGCTG CGCTCTGTTG TTGCTGTCTC TTGGATGCAT GTTTCTGATC 
    GGAGGATAAT TATATACGTT GCCTCAGTCA ACTTTTATTT CCTCATATAT 
    GTTATGTAAT GTTCAACAAT CTTTCTTCTG TTGTTATCTT CTTTCAAAAA 
    AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT5G67600.1 [+] show detail - unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G67600.1

    Model type
    Protein coding
    Computational Description
    unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR