F14531

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F14531

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F14531

Determination of introduced cDNA(s)

  • RAFL09-38-J03 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-38-J03 - Resource: pda08285

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-38-J03 - full reading 
    GACAGTTCTT CTTCCTCAGC TAAACCATAT CCACAAGCTA CCAGTAGTAC 
    TAAACCGACG CCTCCGACAA TCATACAGAT TACCAGTGAT CTCCGCCGTT 
    TCCGGTAAAG AGCTGATACT TTCCGGCAAG GTACGGGCGG TGGAGCCCAA 
    AGAAGCCAAT GCGGTTGTGG CGTCGGAGGG ATATATACTG TTAGACGTGA 
    GGCCGGCTTG GGAAAGAGAA AAGGCACGCG TGAAAGGTTC CTTACACGTG 
    CCACTGTTCG TGGAAGATCC AGACAATGGG CCGATCACGT TGCTGAAGAA 
    ATGGATTCAT TTGGGATATA TTGGGCTTTG GACGGGCCAG AGATTCACCA 
    TGATCAATGA CGAATTCGCC CTCCGTGTTG TGGAGGCTGT CCCGGACAAA 
    GAGAGTAAAG TGCTCGTCGT GTGCGGTGAA GGACTCAGGT CGTTGGCGGC 
    TGTATCAAAG CTCCACGGAG AAGGGTACAA AAGCTTAGGG TGGTTAACCG 
    GAGGGTTTAA CCGAGTATCC GAGGGAGATT TTCCAGAGAT CGAAGGGACC 
    GAAGAGCTTC GGTTCGCCAC GATAGGAGGT GTATCATTTT ATTTACTCAA 
    ACTACTTGTA CTGTTACCGT CTTTTGGCCA GAAGAGTCGT TAAATTGGTT 
    TTTTGGAGCC AAGTGTGAAG ACATTTTTTG TTTTTAAAAT TGTGTCCGGT 
    TTACACAATT GGTCACTGGT TTATCAAAAA AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT3G08920.1 [+] show detail - Rhodanese/Cell cycle control phosphatase superfamily protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Rhodanese-like 2.1e-05
    HMMSmart Rhodanese-like 6.69999687625999e-13
    ProfileScan Rhodanese-like 0
    Gene3D Rhodanese-like 1.59999889349247e-13
    superfamily Rhodanese-like 5.3e-17

    See the detailed result >

    AT3G08920.1

    Model type
    Protein coding
    Short Description
    Rhodanese/Cell cycle control phosphatase superfamily protein
    Computational Description
    Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G42220.1); Has 237 Blast hits to 237 proteins in 53 species: Archae - 0; Bacteria - 52; Metazoa - 3; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR