F14548

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F14548

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F14548

Determination of introduced cDNA(s)

RAFL09-22-A19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-22-A19 - Resource: pda08034

full reading [+] show sequence

TAGACTGAGT CTGGTTACTT GAAGGGGATC ATGTGAATAC GTCGACTGGT 
AAAGAAAGAA AGATTGCTGC TTTTTAGATT TAGATTCGAG AATGTATGGA 
AGATCTGGTC TTGACAGGTT TAAGAAGTCC CAAACTTCGG AACCCTTCTC 
TGTATCAGCA AATCCTCCTC CGGTGGTACA ACAACATCTG TCTCCGGAGG 
CATTGTCGGG GCAAAAAACT CAGATTGGAG CTGGTCAATC AAACTGGCAT 
CCCCCTGATT GGGCGATTGA GCCTCGTGCC GGTGTCTACT CTCTGGAAGT 
TGTGAAAGAC GGCCAGATCC TTGATCGGAT TCATCTAGAT AGACGAAGGC 
ATATCTTCGG GAGACAACAT CAGACTTGTG ATTTTGTCCT TGATCATCAG 
TCTGTTTCCC GCCAGCATGC CGCAGTTGTT CCTCACAAGA ATGGCAGCAT 
CTTTGTGATT GACTTGGGAT CAGCTCATGG TACGTTTGTT GCAAATGAGA 
GGTTGACTAA AGATACTCCT GTAGAGCTTG AAGTGGGTCA ATCCTTACGA 
TTTGCTGCCT CCACAAGAAT CTACCTTCTG AGAAAGAACA GTGAGGCTCT 
CTTTTCTCGC CCTCCACCTC CAGCTGAGAT TAAGCTTCCT CCACCTCCTG 
ATGCTTCTGA TGAGGAAGCT GTTGTTGCTT ACAATACCTT GCTGAATCGA 
TATGGTTTAA GCAATGGAGA ATCTGGTGGT ATGTTAGGGA AAAGGAAAGA 
GAAGACCGGA TCAGAAGCGG GAGTGGCTAA GAGGATGAAG AAAGTGAGAG 
TGAGCTTCAG GGATCAACTA GGAGGAGAGC TGGCTGAGAT TGTTGGCATG 
TCTGATGGAG CAGACGTGGA AACAGAGCCT GGTCCTATAA ATGTCAAAGA 
AGGAAGCCTC GTTGGGAAAT ATGAATCACT GGTGCGAGTG ACACTCATAC 
CCAAAGGCAA AGTGAAGGAA GAGAAAGCCT TTACAGGAGG AACAAGAGGA 
GGTGTAACAG ATCGACTCCA GGAAGCTATG AATATGTTGA AACGGGGTCC 
AAAAACAGGG ATTTACGATG ACCTTTACGG TGGTGACTCA CTTGCCAAGG 
CTGTTGGTAC GTCATGGGCT TCTGTGAGTC AACCAGCAGC TGAAACTGAA 
TGTGGAGGGG TTGGTGAAGA AGATGATAAC GACGATCTGT TTGGTGACTA 
ACTGATTTTG AACACTGAGA TTCCTTTAAG TAACTCTTCT TCTTCTCTAA 
TGCCTACATT CCATTCCAAA GGCATTGGTA TGTTGTTTCC TCTTTGTCTA 
TCCAATGGCT GCAGCAAGAA AAGAGAGCAG CTCTAAGCCC AGGCCCATTG 
TCTTGTGTTA TAAGTAAGAA CCCTGAAATT TGATATGAGC TTGAGCCTGG 
TCAGTGGTCA TTCTAGTTGT GGGTCTTAAC AGGAGATGCA TTACATAGAT 
AGTCATTACA AATAGTGTGG AGAGTAGAGA GTAGGGCCAA TGCAAATGGA 
GTGCATTTGA TTAGACCACT ACTGACTTAC AGATTCTCTC CTCAAGGCAG 
ACCAATTCCA TCAGAAGAGG ACATTTGTAC TCAAATACCT CTCCTCTCAT 
TCTTTTTCAC TTTTGCCTTT TTGCATTATT AAAACAGCAC ACTAATGATG 
TGGGTTGACT TCCCTCTCCC CCACAAAAAC AGAGATTCCA TGTGGGGGGA 
AATGGACAAC AAGTAAAACA CTTGTAAAAA TGGTAATCTG CCTCTGATGC 
TTTAAGATAT GATTTGGGGA TCAATGCATC TTTGCTTTGG GATTTGCTTT 
GTGACAGTTA GTATAAAGAA GAGAGAAGCT GAATGTGCTG CAACCAAATT 
AAAACTCTCT TTTGAGTTAA GCCTATATCC AACTCCTACT CTTCCTAGTG 
TGGTCCATTG TATTTATCAT AAGAGTAAAC TCGCTTGTAA TAAATTATAG 
TAGGGAAAGG TGGAAGACCC ACTTTTGTTT CTC

Gene models with high sequence identity

AT5G47790.1 [+] show detail - SMAD/FHA domain-containing protein
E-value: 0; Score: 99.90

InterPro Scan Digest

Program	Description	E-value
superfamily	SMAD/FHA domain	1.8e-28
Gene3D	Forkhead-associated (FHA) domain	8e-20
ProfileScan	Forkhead-associated (FHA) domain	13.114
HMMSmart	Forkhead-associated (FHA) domain	6.9e-14
HMMPanther	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	7.7e-116
HMMPanther	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	7.7e-116
HMMPfam	Forkhead-associated (FHA) domain	7e-18

See the detailed result >

AT5G47790.1

Model type: Protein coding
Short Description: SMAD/FHA domain-containing protein
Computational Description: SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT5G38840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR