F15212

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F15212

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F15212

Determination of introduced cDNA(s)

  • RAFL09-78-H06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-78-H06 - Resource: pda08793

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-78-H06 - full reading 
    AATGGAAATA CACTCCGATG ACTACTTCTT CCTTCCTCCT CCCTGCTTCT 
    CCTCCCTCAG CCGCCTTTCT CCGGCGGCGC TTCTTCCGCC ACTCCTGGCT 
    TTCCTCTAAG ATCCACCACC GTCTTCCCCA AGTTATGAAT GATTCCACGA 
    GGACTGAAGT ATCCATTGAT AAATCAGAAG TAGACAAGCT TGTTGACAAG 
    ATTGATTTTG GGGAATTATG CAACGATTTT GAGTGCACAA GTAGTCCGCA 
    GGTGGAATCC ACAGCTAGAC AACTTGTTCG CGACATTCTT GAAATCAGAG 
    AAGGAAATCG TGCCTTTGCA TGCTATGCAG TTTCCGTTAA ATATAAGGAT 
    CCGGTTAGAA GTTTTACAGG TCGTGAGAAG TACAAAAGAC CAATGTGGAT 
    AACTAGTGGA TTAGAGAATC CTACCGTGAC GGTACAAGAG ATGGTAATGT 
    TATCGACCAG CGTCTTGCGA ATTAAATGGA CAGTGAAAGG AAAACCAAAA 
    TCTATTCTTG CTGCTGTAAG TGGAGATTTG ATAGTAAAAG TCAAATCTGA 
    ATTTACTCTT AACCAGATTA GTGGGCAAGT GTTTGAGCAT GAAGAGTCTT 
    GGGACTTATC TTCATCATCC CCTATTGCTC AAGCCTATTT CTGGACATCC 
    CGCCGCCTCT TTGCTGCTTC TGAATCCGCA AAAGATGTCG CCGATGTCAC 
    AAAAGACTTG ACCGCCAATT TGACAACTCG AAAAGAGGAC ACAGATATAT 
    ATCGCGATCC AACCGATCCA AATAAGTTTT TCCAAAGAGA CAACAGCTTT 
    GAGAGAGATG TGTATCAAAT TGCACTGTTT CTAGCCATTG TCTATTTTGT 
    TGTACAGTTC TTGAAGAACA CAATCTAGTT ACCTTCTCTC CCATCCTCTA 
    TAACAGATAT GTAAATGCCT ATATATTGTT GTATATGATC TGTAAAAAAA 
    AACTGAACAA GAAAAGAGAT GTGTTTGTTT GTGTTGGAAG AAAGACT

    Gene models with high sequence identity

    1. AT1G65230.1 [+] show detail - Uncharacterized conserved protein (DUF2358)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G65230.1

    Model type
    Protein coding
    Short Description
    Uncharacterized conserved protein (DUF2358)
    Computational Description
    Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); Has 45 Blast hits to 45 proteins in 18 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR