F15304

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F15304

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Original: F15304

Determination of introduced cDNA(s)

  • RAFL09-66-N02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-66-N02 - Resource: pda08650

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-66-N02 - full reading 
    ATGGCCGGAC TTCTAGCTTG GGCTGCCGAT GTCGTCGGTA AAAATGGAAA 
    AGAAGGAGAC GATGAGAAGG ATCGGATCCC ATTGGTTTTC ACGGAGGAGC 
    AGCAGAAATA CGTCGATGAG CTTGGCCGAA AAGCGACAAA CCTCAGCCGT 
    TCGATCCAAG ATCTGCGGCT CAGATTGCCT CCACCGGATA TCTCCCAGCG 
    TCTACCTGAC CTTCATGCTC ACTCCCTTGC GTCCAATGCC GCTCTCACTC 
    TTCAGCTTGA TTCGCACTCC GCTACTCGTG AACAGGCACA CATGAGAGAG 
    CAGACACTGC TGGAAGAAAA TAGTGCATAT GAGAATGCAA TATCAACCTG 
    TGAGACAAAA ATAGAAGAGA AGAGGAATGA AGCAGATTCT CTTCTTAGAA 
    AGTTGAAGGA GCTAGAAGCT GTAGAGGAAA ACTTGAAAAC TGAGCAGGAT 
    AATGCACAAG CTTCTCTAGA TGCAAGGCAG TCCAAAAGCT CTAGTGAAAC 
    TGTTATTCAG CCTGATGGGA ATGGAAAAGA TGGAGCAGAT ACAGAGGCCA 
    TGAAGTCCTT TATGCTAGAG AAGTTGGAGA GCAAAAAGAA CGATATGAGT 
    TTAATGGAAG AAAAAGTTCA GGATTTAGAG AGGAGTTGGG CTGTTATACA 
    GGAAAGAGCA CTGAAGCAGC CTTCTCCAGC TCAGAGAGAG AAGACACTGG 
    ATAAACAACT TCATAGCCTA ATCGAGCAAT TAGCTGCAAA GCAGGCACAA 
    GCAGAGGGGA TTGTTGGTGA GATTCATCTA AATGAGATGG AGTTAGAGAG 
    ACTAAACAAT TTATGGAGAA GATATGAAAG CTTTAACGTT GAAGGGAACG 
    CTGCGAGGAA CAGATTCAAG AGAACAAATT CAGATAGAGA ATTTACATCA 
    GACCACGAAG TTGATGGTCA TTCCTACCTT CCATATTCAT CTGCTACAAG 
    AAATGGGACC CAAACAAGGC TTATGTATCT CAGGTCAGCT TTTGTCGTCT 
    ACATTTTGGC TTTGCAAGTC CTGGTTTTCA TCAGAATTTC CTTTTGAGAA 
    GTTGTGTACA CGAGTAGTCT GTTCTGCTTT TAGTTTGCGC AAGGGAGTCA 
    AAATACTGCA TATAAAAATT TATAGGAATA CAATAATTGT TGTCAAATGG 
    TTTTCTGTCC TTCCATATGG ATATATGGCA ATTGAATACT GAGACTCCTA 
    CATGAATCTT TCTTTACAAT TTTTCTTGAT ATTAGATATA TGTCTCCACT 
    ACTCATTCTT GAGGGATGCT TTCTAGTTAT CTGTCTTCAT CT

    Gene models with high sequence identity

    1. AT5G15880.1 [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; M...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G15880.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR