F15608

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F15608

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F15608

Determination of introduced cDNA(s)

RAFL09-12-E16 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-12-E16 - Resource: pda01764

full reading [+] show sequence

GACTCTCTCC TCTTTTGTGC TCCCAAACCA AACATAACAC TCACAATTTA 
ACTCTCTCTG TCTCTCTCTC ATATCTCTCA CTTCTTCTCT TTCTTTTTAA 
GTCCCCAAAA TAACCTCGAG ATCGATGGAC TCAAATCTGT TCATAACTCC 
CACTTCTTCT CTCAAATCCC AAGCCTTGGT CTCTTCATCA TCCTAACTAT 
ATAAGAAAAA GAAAAAACAA CGTAAAGTTT CTGCCATAAA TCATGAGACC 
AATATTAGAC CTCGAAATTG AAGCTTCATC GGGCAGTAGT AGCAGCCAAG 
TGGCCTCAAA CTTGTCTCCG GTTGGGGAAG ATTACAAACC AATCTCGCTG 
AATCTTAGCC TCAGTTTCAA CAACAACAAC AACAATAATC TGGATCTTGA 
ATCATCGTCT TTGACGCTGC CACTTTCGAG CACGAGTGAG AGTAGTAACC 
CGGAGCAGCA GCAGCAACAA CAACCATCTG TATCAAAGAG AGTCTTCTCT 
TGTAACTACT GCCAAAGGAA GTTCTATAGC TCTCAAGCGC TAGGTGGTCA 
CCAAAACGCT CACAAACGTG AGAGAACACT CGCCAAACGC GCTATGCGTA 
TGGGTCTTGC TGGGGTCTTC CCCGGTAGAG GATCAAGTAG CAATTATGCG 
GCTGCTGCCA CAGCAGCCGC TCTCTCGTGT TTGCCGCTTC ACGGAAGCGG 
AAACGGGAAC ATGACATCGT TCAGGACTTT GGGAATCCGG GCACATTCCT 
CGGCGCACGA CGTCAGCATG ACAAGGCAGA CACCAGAAAC ACTTATTAGA 
AACATTGCCA GGTTCAACCA GGGGTATTTC GGTAATTGTA TACCTTTTTA 
CGTGGAGGAC GACGAGGCCG AGATGCTCTG GCCGGGGAGT TTCCGGCAAG 
CTACGAATGC GGTTGCGGTT GAAGCGGGTA ATGATAATTT AGGTGAAAGA 
AAAATGGATT TCTTGGACGT CAAGCAAGCG ATGGATATGG AAAGTTCTCT 
TCCAGATCTA ACCTTGAAGC TTTGAGCTTT CGTTTTTTTT GTTTTTTTTT 
TTGCTGAATT TGGATTCTTA ATTTGGTGCA TCAGCTTCAT AACTCTATTA 
TGTACAGTGA GAGTTTCACA AACC

Gene models with high sequence identity

AT1G66140.1 [+] show detail - zinc finger protein 4
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	Zinc finger, C2H2-type	0
superfamily	C2H2 and C2HC zinc fingers	4.6e-07
ProfileScan	Zinc finger, C2H2-type	11.427
HMMPanther	WILMS TUMOR, WT1	0.00057
HMMPanther	EARLY GROWTH RESPONSE PROTEIN	0.00057

See the detailed result >

AT1G66140.1

Model type: Protein coding
Short Description: zinc finger protein 4
Curator Summary: Encodes a zinc finger protein containing only a single zinc finger.
Computational Description: zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR