F15745

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F15745

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F15745

Determination of introduced cDNA(s)

  • RAFL06-81-B20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-81-B20 - Resource: pda03796

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-81-B20 - full reading
    ACCACTCAAA TCTCTTCACC TTGGCACCAT CTATAAATAT CCTCAAACAT 
    TAGCCTCTTT AAGAAATCAA TTCCAACCTT TTAAAGATTA ATCTTGAAAA
    GTTTCTAATA AAAGGAAGAG AAGTGATCAG GTGTGGTGAC GAGTAGGATA
    TGAAATTCTT GTTGGAACTC GTCGTGCCTT GTTTTGGTTC ACAACAGTTC
    CAAGAATCCG CCGCAAGTAC TGCGGATGAT TCGGTTTCTG ACGAAACACA
    AACGCTGATG AAACAACGGA GGCGACGGAA ACGCGTTAGA GTGGCTGGTC
    AACCTGGACA AGTGGCAGAG TGGAGACCGT CTCTTAGCGT TATCTCCGAG
    AACAAGCCGG CGATAACGAA GATATCAGAA AAGAACGAAG AAAAGAAGAA
    AGTCCGTCGG AAAAGTGAAG GCAACGGCGG CGGAGACGCA TCATCACGGT
    CCGGTGGTGG TCATATTCGT TTCCGTAGTG ACGATTTCGG GAGAAATGCT
    TTCGAACCGG TGATTCCGGC ATTCTCGCCG ACTCCGTTCA TGTTTTGAGT
    TTAAGTTTCT GGTGAAGTTT ATGTGTATAA TATATTGATA AATATGTTAT
    TGTTAATGGA AAGATGTAGC ATTAATGTAT ATACTTCTTT GATTTTACTA
    CAAAAAAAAA AAAAAAA

    Gene models with high sequence identity

    1. AT5G54585.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G54585.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR