F16238

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F16238

Determination of introduced cDNA(s)

RAFL09-91-I19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-91-I19 - Resource: pda09016

full reading [+] show sequence

GGCGAACGAA ACCCTAATCA TCACTTCTCC ACTTTTGTTC GTCATCCTCT 
TCAAAATTTC TTCAATTTGA TTCTGCAATT TCCTTTATCT CTCTCTGGAT 
TAAGTTTCAA TTTCTTCTTA GCCCGCCATG GATGCTCAGC GAGCTCTGTT 
GGACGAACTA ATGGGCGCAG CTCGTAATCT GACAGACGAA GAGAGAAGAG 
GGTTCAAGGA GGTTAAGTGG GACGATAGAG AAGTATGTGC ATTCTATATG 
GTTCGATTTT GTCCTCATGA CCTCTTTGTT AACACGAAAA GCGATCTTGG 
AGCATGCTCG AGAATTCATG ATCCAAAGTT GAAAGAAAGC TTCGAGAACT 
CTCCGAGGCA TGATTCCTAT GTGCCTAAAT TCGAGGCTGA GCTTGCACAG 
TTTTGCGAGA AGTTGGTGAA TGATCTTGAT AGGAAAGTTA GGCGTGGGCG 
AGAACGTCTT GCACAAGAAG TTGAACCGGT TCCACCACCT TCTCTATCAG 
CAGAGAAAGC TGAACAATTG TCTGTCTTGG AGGAGAAAGT TAAGAACCTT 
TTGGAACAAG TGGAAGCACT TGGTGAAGAA GGCAAAGTGG ATGAAGCTGA 
AGCGCTAATG AGGAAGGTGG AAGGGCTAAA TGCTGAGAAG ACAGTGTTGT 
TACAACGACC AACTGACAAG GTACTCGCGA TGGCTCAGGA GAAGAAGATG 
GCATTGTGTG AGGTTTGTGG TTCATTTCTT GTGGCTAATG ATGCAGTAGA 
AAGAACACAG TCTCATGTCA CTGGAAAGCA ACATGTTGGC TATGGCTTGG 
TTCGGGATTT TATTGCTGAA CAAAAAGCTG CTAAAGATAA AGGAAAGGAA 
GAAGAAAGAC TAGTAAGAGG AAAAGAAGCA GATGATAAGA GGAAACCAAG 
GGAGAAGGAA AGCGAGAGTA AGAGGAGTGG TTCTAGTGAT AGAGAAAGAT 
ATCGTGATCG AGACCGAAAC AGAGATGGTG ACAGACACAG AGACCGTGGT 
AGAGATTATA GAAAGCCTTA TGACAGGAGA TCGAGGAGTG GGAGAGAGGA 
CCGAGATCGA AGCAGGTCAC GATCTCCTCA TGGAAGGTCT GGTCACAGAA 
GGGTGTCGAG AAGCCCCATT CGCCAATACT AGTTTGAGAC CCTCGTGGAA 
GGTCTGGTCA CGAAAGGGTG TTGAGAAGCA CCATTTGCCA GTACTAGTTT 
GAGATAAGGT GTTGTCACTA TGTCTTGGGG CCAGGAACTT TGCAAATTAA 
TGAGGTAGAC AATGTGATAC CCCCTTTGGT TTCATAAGCA TGTGTTGTCT 
TTTGGAACTT CCTTGTTAAA ATTTATGGAT AAAATTTGTC TTTCTACCGG 
ATCACAGCTA TTCTAAGAGT TTGAGACCTT ACCGATTCTC CTTCATCGGT 
TATTTGTTAA GAGGTCAAAA GCGTTGAGGT AGGTATTACC CGTAAAACTT 
TTACATTTTC ATTGTATTTC TCGATACTTG AGATGCTATA GCGTCATTTT 
ATTTTATTTT TGTCTTTTGG TACACCATTT CAAGTTTGAT ATACCTTTCT 
GATTTAAAAA AAAAAACAAA AAAAAAAAAA AAA

Gene models with high sequence identity

AT5G51410.1 [+] show detail - LUC7 N_terminus domain-containing protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
HMMPfam	LUC7 related	1.2e-86
HMMPanther	CISPLATIN RESISTANCE-ASSOCIATED OVEREXPRESSED	3.5e-123
HMMPanther	LUC7 related	3.5e-123

See the detailed result >

AT5G51410.1

Model type: Protein coding
Short Description: LUC7 N_terminus domain-containing protein
Computational Description: LUC7 N_terminus domain-containing protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 11347 Blast hits to 6019 proteins in 331 species: Archae - 9; Bacteria - 137; Metazoa - 6515; Fungi - 1614; Plants - 1008; Viruses - 20; Other Eukaryotes - 2044 (source: NCBI BLink).
Link: InterPro Scan - TAIR