F16351

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F16351

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • decreased width (PATO:0000599)
    (Rosette leaf::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F16351

Determination of introduced cDNA(s)

  • RAFL05-01-O06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-01-O06 - Resource: pda00673

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-01-O06 - full reading
    ACCTCTTCTT CTTCTTCGCA TAAACCTTAA AAACCATTTC CACGATCTTC 
    TTCTTCTTCT TCCCTCAAAT ATAGCTTAGG ATTTTCTTAA TTTCCTCTAC
    CCAAGCTCCA TGGCTGCTTT CAATTTCTTC CTCTCTTCTT AATTCTCTCA
    GGTAGGGGAG ATTTGAGTAG TAGTAGATTG TTAGATTTGT AATTCAGCTA
    TTGGTGAAGA GGAAGGGAGA GAGAGATGTG TTGAATTGGT TGAGTTTGGT
    GGAGGAAAGA AGAAGAAGAA ATGAATGTGA GCCATGCATC GGTACATCCA
    GTGGAAGATC CTCCTGCAGC TGCGACGGAA GTAGAGAATC CGCCTCGGGT
    GAGGATGGAT GATATGGAAG GAATGCCTGG AACATTGCTT GGTCTTGCAT
    TGCGTTTTTT TCAGTTCTTG TTTGCTGCTG CTGCTCTTTG TGTCATGGCT
    TCTACTAGTG ATTTTCCTTC CGTTACCGCC TTCTGCTACC TAGTTGCAGC
    TACTGGTCTG CAGAGCTTGT GGAGTCTTGC ACTAGCCATG GTTGACGTCT
    ATGCCATTAT GGTCAAACGC TCTCTACAGA ACCGTCGACT TGTGAGCTTG
    TTTGCAATTG GTGATGGGGT GACATCGACG CTGACTTTTG CAGCAGCTTG
    TGCATCGGCA GGCATAACGG TTCTAATAGA CAACGATCTG AATAGCTGCG
    CACAAAACCA CTGTGTTCAG TTTGAAACAT CAACGGCATT AGCTTTCATA
    AGCTGGTTCG CTGCTTTGCC TTCGTTTCTC TTCAATTTCT GGTCTCTTGC
    ATCCCGTTGA CACGATACTG CTCAGCAAGA TGTGTTTTCA TGGTGTGTTT
    TTCGGTGTAT AGTGACTGAT TTTTCTTCTT CTTTCTTGTT TTGGGTTTGG
    AACCAACTTT CTTCAAACCC AATACTTGGA AACTGGGAAT TGTTTTGTAG
    ACGACGACCT TATTCATTTT GTTGTACAAT GAAACTATCT GGTCGGCTTT
    GTTGTATGAT TGAAGAAATT TCAGATGTTG AATGCAC

    Gene models with high sequence identity

    1. AT2G28370.1 [+] show detail - Uncharacterised protein family (UPF0497)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G28370.1

    Model type
    Protein coding
    Short Description
    Uncharacterised protein family (UPF0497)
    Computational Description
    Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G37200.1); Has 210 Blast hits to 210 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 210; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR