F16446

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	coiled (PATO:0000404) (Cauline leaf::Shape::spiral)
	rosette leaf (PO:0000014)	abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	increased thickness (PATO:0000591) (Stem::Shape::thick)
T2
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	increased width (PATO:0000600) (Rosette leaf::Shape::wide) present in greater numbers in organism (PATO:0000470) (Rosette leaf::Number::many) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	abnormal (PATO:0000460) (Stem::Others)
	stem internode (PO:0020142)	decreased length (PATO:0000574) (Stem::Shape::short internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F16446

Determination of introduced cDNA(s)

RAFL05-15-D05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-15-D05 - Resource: pda01304

full reading [+] show sequence

ATCAAACCTC AACAAAAATA CTCTCTCTTA TTTCAGACTT TTCAGACAAA 
AACAGAGAGA AACTTTTTGT GTTTATGTGT TTTAAGATCT GATTGATAAA 
AAAGATGCAA GTTATTTCTC CTTCGTCTCC GGCGCCGAGA TTCGCCGGAA 
AAGAGAGATT TTCAGAAGTT TACGGCGAAC TAAACGACGA TTTTGGCTCT 
AAACTGAAGA TTAGTTCTAA AGAGGAAGAA AACAGAGATG ATGATTCATG 
GTGGAATCAG AACGGAACTG ATAAAGATGA TGAAGGAAGA GAAGAAGATT 
TCTCATTCGC AAGTGTAAAC GCAGATAATT CACCGATAAC CGCAGATGAA 
GCATTCGAAG ACGGTCAGAT CCGACCGGTT TATCCTCTGT TTAACCGGAA 
TATTTTCTTC GATGATCCAG AGGAAAAAAC TTTACGTTCA CCTCTCAAGA 
AACTCTTCGT TGAATCCACA ACCACAGAAG AAGAAGAAGA AGAGTCAGAT 
ACGGTGGGTC CATATTGTTC ATGGACAAAT CGTACGGTGG AGCAAGCATC 
ACCAGAGACT TGTCGGAAAA GTAACTCAAC AGGGTTCTCA AAGCTATGGA 
GATTTAGAGA TCTTGTTTTG AGAAGTAACA GTGATGGAAA AGATGCGTTT 
GTGTTTTTAA GCAACGGCTC TTCATCTACA TCGTCGACGT CGTCTACGGC 
GGCGAGATTG AGTGGTGTGG TGAAGTCGTC GGAGAAAGGG AAAGAGAAAA 
CGAAGACGGA TAAGAAGAAG GATAAGATGA GAACGAAATC GGCACATGAG 
AAATTGTATA TGAGAAACAG AGCAATGAGA GAAGAAGGGA AACGAAGATC 
GTATCTTCCG TATAAACATG TTGGGTTCTT CACTAATGTT AATGGTTTAA 
CCAGAAATGT TCATCCCTAT TGATTAAACC GATCTGTCGT ACCAAAATCT 
CTACCGACAA ATCTTTGCCT TTTGTATATA TCTAACCTTT TTTTTGGTTT 
CTGTGTATTA TAAAACCTTC TTTTTGTAAG TAAAAGTGAA ACTTTACTTA 
TTAACTTTTC GTTTGTATCA TTTGATTAGT TTTTTTTCTT CTTTGATGTA 
AAGTATTTTT TGATTTTGAA AGTAGTAGAG AAAAGATTCA CC

Gene models with high sequence identity

AT1G70420.1 [+] show detail - Protein of unknown function (DUF1645)
E-value: 0; Score: 100.00

InterPro Scan Digest

See the detailed result >

AT1G70420.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF1645)
Computational Description: Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link: InterPro Scan - TAIR