F16548

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F16548

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F16548

Determination of introduced cDNA(s)

  • RAFL06-80-H11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-80-H11 - Resource: pda03781

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-80-H11 - full reading
    ACTGAGTCGC CATGGAACTG GTGTCTCTTC CGATCCACCA CCGTACGGCG 
    CCGCCGAATT TTCCACCACT CGAAACTGGA AATCCAGTAG CTAACCGGAT
    TGGACAAGCT CTACGATTCA GCAATGTTAG AATGAGAAAG CCCGCGTATT
    TAGGAACGAT CTTATCTGAG AAATCAAGAG CAAGAACATT AACGACGGCG
    GAAGCAGTTT CCGGAAGTGG AGTTTCGCTT CCGCCGCTGG ATTTGACTGA
    GGATAATATC CATTTGGTAC TATCCGAAGC TCGTATCGAG CTAGCACAAC
    TCTTCGACTC ATCGGTTGGG ATAACAGGAC AAGTAGAGTT AGTGGAACTA
    GACGGACCAT TCGTTACGAT AAGTTTAAGA GGCAAGTTTT GGCATACGCG
    TGCAATGGTT CTAGCTCGAC TTGGGAACTA CTTAAAACAG AGGATCCCTG
    AGATTTTGGA GGTTAATATT GAAGATGAAA AGCAACTCGA TGATAGTCCT
    GCAAATTTCT AAATCTTCCA TTTTGTTCAT TTGGAAAATA TTTATTGATC
    TTTCTTGCTG CTTAATGTGA CTTTGAAGTT TGATGATGCT TATGAGTTGT
    TAAAACTCTG TTGAGTATCT AAAATCGATG CTTTGTAGCA AAGTATACAT
    CGTTTCTAAA AGCCCAAAAA AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT2G33180.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G33180.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR