F16609

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F16609

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F16609

Determination of introduced cDNA(s)

  • RAFL06-75-B10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-75-B10 - Resource: pda03546

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-75-B10 - full reading 
    ATTTTTCCTC GAAATATCTA ATCCACAGAT AGATAGAACA CTCTGTGAGC 
    TTTATCCGCT TCCAATGGCG TCTTCCGCCG CTTCTCCTTC CTTATCTCTA 
    CTCTCATTCA CCTCGAAGCC ACCTTATCCC TCCGGCTCTC AGCGGCTATT 
    TGCGTCATTC AGAACGGACG GTCTTTTCGC GCCTTTAACA CTGAAATCCC 
    GACGCGGCCG TGGTATAGTC GTTAAAGTAG ATGACGTCGA TGCTGATGGA 
    GGTGGAGCGG ACGAGTATGA TATGGATGAT GAGGAGGTAG AGGAAGTTGA 
    CAACAAGAAG GACTATGATG TCGAGTATGA CCCCTTGGCC GCCGCGATAG 
    CCGCTGCAGG CGGTGGTGGT GATGGAGATA TCGCTTTTGT TCAGAGTAAG 
    AGTTTTATAT CGACACAAGG ATGGGATTCG GATATGGTGG TTGATTATCG 
    GATAAACGAA GATGAGTTTC ATAAACTCAG CTTAATGGAC TGTGATTTCT 
    TTATCAGAAA ACCTCCTGAT CCAGATAATG ATGTTTATGA TTTCAGAGAG 
    ATGTATGTTA CTCCTCCGGA TACAGATATT TACTCAATTC CGAGAGTTCT 
    TGCACCGATG CCTCAAAAGT ATATTCGATG TGCAATGAGT GACTATGGAT 
    GTTACAATGT CACTGAACCA CCTATTGATG CCCCCAGAGA TCCACTGTAC 
    AAATCTGAGA GGGAGATATC CAAGGTTTTC TTGACAAAAC ATTACCGGAA 
    CAGAAGGACA AACGATCCAG AATTTGTGCT AGATCTTGAA GAGATATATG 
    TTATTGATTC CAAGACAAAG TCAATCACCA GAGCCAGAGT TCTGGTGACA 
    GTTCCGGGAG GAAGAAAAAG GGATAGGAAG GATGACTTGC TTGTGATACG 
    AGATAATGGA ACCTCCTTTA AGATCATACA CGTGGGTGAA AGAGATGACC 
    CAACAACGGT AATAGAAAGA GAAGAGTGGA CCAAGACTAG AGAAGACATG 
    GAGAAACATC TCAGGAAGCT ACGAGACTTC AGTGTCTCAA ATTGGTTCTA 
    GAAGAACTCG AGAGACACCA AACGACAAGT CAGCATAACT TTCTTCCTGA 
    GATGGAAAAC GAGAGCAGAT GATCTAAATC GATGATATGG TGGAGGGTAT 
    ACAATTTTGG TGACCTCAGG TACTGCACTA GCAGCAGAGA TGGATGTGTT 
    ATTAGATGAA TATGGGCCTC TAGAAAAAAG TGTGTAGATG CAATAGTTTG 
    ATGGACTAAC ATTCAATGAC TAGAGAAGCT AGCTTATTTG CAAGTTTTGA 
    GGTGTTTAAT TCAAGTTTTC AATTGATGAT T

    Gene models with high sequence identity

    1. AT1G21600.1 [+] show detail - plastid transcriptionally active 6
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G21600.1

    Model type
    Protein coding
    Short Description
    plastid transcriptionally active 6
    Curator Summary
    Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.
    Computational Description
    plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR