F17551

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F17551

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
rosette leaf (PO:0000014)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)
T2  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • epinastic (PATO:0000945)
    (Rosette leaf::Shape::epinastic)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17551

Determination of introduced cDNA(s)

  • RAFL09-96-C10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-96-C10 - Resource: pda17923

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-96-C10 - full reading 
    CCGGGGTTAG TAGTTATATA TATGTTGGAG GTGAAAGGAA TAAAATAAAA 
    TTTGTTCTAG GTGGATTCTT AAGAAAAAGA AGGAAACGAA AACAGAGGAA 
    TAACAATGGC AGGGAGAATA AGCTGCTGTC TAAATCTTCC TCCCCTAGAT 
    TCAAATTCTG CACAATCATT AGCTTCACTG CTCAAGACAA CGTCAAAGAT 
    CTCTTGTAGG AGAACAGAAA ATGAGACAGA GCCACGGAAA AACAAGTGTT 
    CTTTTGTCTT GGGGGTGGCG GCAACTGTCG TAATCGGCGG GATTCAGATC 
    AATGATGTTG CATCAGTGGA AGCTGCGGTT GTGAAATCGC CGGTAGAAGA 
    GATGGCTGCG GGTGTGGTGC CGCCGCGGAG GTGGAGTGAC AAGAGGACGT 
    GTCCGCCTTG GCTTGAGAAC TCGCTAGAGA CCATCGTACC GGAGAATCTT 
    CCTCGTCCGT CTGCTCATCG ACGTTTGGAG TTAGCCGGAT TAGCTAAGGG 
    TGATGCACCG CCGGTCGGTG TGGTGATGAC ACGTGTCAAC AGGGGTGGTT 
    GTTTCTCCGT GTAAATTGGA AGTTCATTAC GTGTAAGGGA GATTGTTAGG 
    CAGGTGTAAA AAAAGTCAAT TAGAAACAAA TAATACACAC AAAAACTATT 
    GTAGATATAT TAAATTTTAA GTATTTGTTT GTGTAAAAAA AAAA

    Gene models with high sequence identity

    1. AT2G25625.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G25625.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR