F17808

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F17808

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17808

Determination of introduced cDNA(s)

  • RAFL03-04-A04 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL03-04-A04 - Resource: pda00179

    full reading [+] show sequence

    Nucleotide sequence: RAFL03-04-A04 - full reading 
    CCAAAATAAA AATCATGGCG AGACTTTTCG TCTCTATCCC TATGCAACCC 
    ACACAAATAA GCTTCCCTGC GTCTTCTTCT CAGCCACTAT TATCTCCGCC 
    GGCGAACAAT TTCACCGATG GTGGAGCTGG GGGATTATGT CTTACACGGA 
    GAATCAGAGA CAGTTCCGTG GTGACGCGAG CAGGGCCTAG TACGAGCAGC 
    TACTTGCTCG CGTTCGCCAT TCCTGCTACT CTTATCGCCG CCACTGTCTT 
    CACTTCAATC AAAATCGCTG ACAAACTCGA CGAAGATTTC CTTGAGGATA 
    TTGCGTTGAA CCAAGCGATA AAAGCAGCAG AAAAGGGAGA GAATGGAGAA 
    GGTGATATCT CACTGGACGA TGTGATTCAA GAACCTGTGC TTCAACGAAC 
    ACGTAACCGG CCTAAACGTG AAGTTTAAAA ACGCACACAC AGCTTCTTCA 
    TGATGGGAAT AGACGTTGTA ACTGTAATAC ATGTTGTGTT TTGTATAAGA 
    AAATTTAAGC GTGTAGCCTT TCCTAGTCCC GTTTATAGTT GTAGTTACTG 
    GTTTTACATT ACCGTTTGAT CATTTTGTAA AGAAAAAACG GATGATGAAT 
    CAAAAACCTC ATTACAGTTG AAAAAAAAAA AAAAAACTCG AGG

    Gene models with high sequence identity

    1. AT4G31560.1 [+] show detail - high chlorophyll fluorescence 153
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G31560.1

    Model type
    Protein coding
    Short Description
    high chlorophyll fluorescence 153
    Curator Summary
    Encodes HCF153, a 15-KDa protein involved in the biogenesis of the cytochrome b(6)f complex. Associated with the thylakoid membrane.
    Computational Description
    high chlorophyll fluorescence 153 (HCF153); Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR