F17846

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1	cauline leaf (PO:0000013)	abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	increased length (PATO:0000573) (Rosette leaf::Shape::long)
	stem (PO:0009047)	present in fewer numbers in organism (PATO:0001997) (Stem::Number::few)
	stem internode (PO:0020142)	decreased length (PATO:0000574) (Stem::Shape::short internode)
T2
	cauline leaf (PO:0000013)	abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	epinastic (PATO:0000945) (Rosette leaf::Shape::epinastic)
	stem internode (PO:0020142)	decreased length (PATO:0000574) (Stem::Shape::short internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17846

Determination of introduced cDNA(s)

RAFL06-15-L14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-15-L14 - Resource: pda17211

full reading [+] show sequence

CCCGGAGTTT CCTACTCGCG TTGTTGTTCT TAAGTCATAA GTGTTAGGTT 
TGAATCAATC GCTCTAGTAC CAGTGGAACT GTTGATTTGC TTAGCGAGAA 
GATGGATCTG AGACCCTGAA GATGATCTGG AGTTATCTTG GTCCGAGCAG 
TTCATATGTC CTTAACATCT TCGGGGAATG TCAAAACCAT TTTATAAACA 
CAAAATCTTC TTCTTCTTCT TCCTTTCTCT CTCTCCATAA TTCTTGTTTG 
CGTCATTCAT TCATCACATA TCCACATACC ACAGAGACAG AGGAATCGTC 
CTTTATCAGA AATGGCAGGC AGTAATCTTC TCCAAGGTAT ACTCTATTTA 
TTCTTCTTCT TTGATGGTAC TACTATTTGA TCTGATCTAT TTTGAGTTCA 
TTTTTCTCTA GTTTGGACCT GGAATCAGTT TCTCTCTTGT TAGCTATTTC 
TCTCTTCTCT ATTGTATGAA ATCAAATCCA AATCTATTTT GCTCTTGAAG 
ACAACCTAAA GCTTTCACCT TTCTCTCTTC TTTACATTTC AATAAAGCTC 
ATTGAGCTAT TTTGCATTTT CAGTCTCTTC TAATAAGCTC AATGAGCATA 
TATCTATTTT CAGTCTCTTC TAATTAGCTG CAACAGAGCC AGCCATATGA 
TTCTTGTTGC TACTAAACCT AAAGACTCTC GCGGAAGCAG CAGCGATGAG 
ATGATGATGA ATGATCTGGA TGAGATAATA TTTGGTGAGA ATAGTTTGGG 
TCATTCTTCA TCTGCCTCTG GAAATGATCA GAAGAAGCAG AAATCGTCTA 
AAAACAATGA GCTCATTCAC TTGTGAGATG TGTTTTGTTT TTCTTAGTGG 
ATTTGGATTG GTGTTTAGTC TTTGGGAATA TGCATCAACA GTTGTTATGT 
AAGTAAACTA AAATTAGCAG CCTTGTGGGA TTGAAATATA TTTAGGGTGT 
AACCTGTATA TTTCGCTGCT CTGTTTTGGT GTTATTAATT TATCTAAGTG 
ATTAATCGTT AAGACTTAAA ATTATATCAA TATTTTAATT GACTAAAAAA 
AAAA

Gene models with high sequence identity

AT3G03020.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 0; Score: 100.00

InterPro Scan Digest

See the detailed result >

AT3G03020.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR