F18011

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F18011

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F18011

Determination of introduced cDNA(s)

  • RAFL05-01-M12 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-01-M12 - Resource: pda00734

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-01-M12 - full reading 
    ACTGTCTACA AAATCATTGA AGATCTACCC AAAAAAAAAA AAAAAAGAGA 
    TGGTTCTGCT AGAGAAGCTT TGGGATGATG TTGTGGCTGG ACCTCAGCCT 
    GACCGTGGCC TTGGCCGCCT CCGTAAGATC ACCACCCAAC CCATTAATAT 
    CCGAGATATA GGAGAAGGGA GCAGCAGTAA GGTGGTGATG CATAGGTCGT 
    TGACCATGCC GGCGGCAGTG AGCCCTGGAA CTCCAACGAC TCCAACCACT 
    CCGACGACGC CACGTAAGGA TAACGTGTGG AGGAGCGTCT TTAATCCGGG 
    AAGCAACCTC GCCACTAGAG CCATCGGCTC CAACATCTTT GATAAACCCA 
    CCCATCCAAA TTCTCCCTCC GTCTACGACT GGTTGTACAG CGGTGACTCA 
    AGGAGTCAGC ACCGTTAGGG ATGGTCCGAT GGAGTGTGAC ATGCGGGTGA 
    TGTAAATATG GTGACCTGAT CTTCCGCCAC CTTACTTTGT TTTTTTTATA 
    TTGTTTTTGT GTACTTTATC AGAGTGGATA AAGTGACGGG GAATGTTTTT 
    CTTTTGTACA AAAAACTGTC TTCCCACCTA AGCAATGTGT GTTAGTTTCT 
    GTTTTGGGCT GTGTTTTGCA AGTTTTTGTA TTTCAGAGTT GTGTAGTGTA 
    GTTGCAAGTG GCGGTTGGAT CTTTCACTAT CTTGTTGGAT TTTGATGATG 
    GTTGATGCTT TTGCTTTAAT GTTAAATAAA TAAGCATACT TTTGCT

    Gene models with high sequence identity

    1. AT1G28330.1 [+] show detail - dormancy-associated protein-like 1
      E-value: 0; Score: 99.87

     

    InterPro Scan Digest

    See the detailed result >

    AT1G28330.1

    Model type
    Protein coding
    Short Description
    dormancy-associated protein-like 1
    Curator Summary
    dormancy-associated protein (DRM1)
    Computational Description
    dormancy-associated protein-like 1 (DYL1); CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2); Has 226 Blast hits to 226 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR